RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 EMX1Q04741 257 aaPredicted RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 SF3A2Q15428 464 aaKnown RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 ZNF141Q15928 474 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 CCDC157Q569K6 752 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 RRM2BQ7LG56 351 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 ZBTB46Q86UZ6 589 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 NRMQ8IXM6 262 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 BMPERQ8N8U9 685 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 OR14A16Q8NHC5 309 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 ACOT11Q8WXI4 607 aaPredicted RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 PRSS27Q9BQR3 290 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 ANKRD19PQ9H560 264 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 IMPAD1Q9NX62 359 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 ERVK-18Q9QC07 812 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 PCDHGB1Q9Y5G3 927 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 PCDHGA10Q9Y5H3 936 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 C2orf92A0A1B0GVN3 265 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 POLR1CO15160 346 aaPredicted RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 GUSBP08236 651 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 ZNF883P0CG24 379 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 SPCS2Q15005 226 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 EBPQ15125 230 aaKnown RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 DECR1Q16698 335 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 FAM69BQ5VUD6 431 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 LINC00471Q8N535 108 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 IQCF1Q8N6M8 205 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 AGBL5Q8NDL9 886 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 FAR1Q8WVX9 515 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 LCORQ96JN0 433 aaPredicted RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 CCDC90BQ9GZT6 254 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 DSN1Q9H410 356 aa19.46■□□□□ 0.71
PTPRF-207ENST00000436724 WARS2Q9UGM6 360 aaKnown RBP19.46■□□□□ 0.71
PTPRF-207ENST00000436724 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-207ENST00000436724 TRAPPC13A5PLN9 417 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 HEXBP07686 556 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 FGF5P12034 268 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 GABRB1P18505 474 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 NR4A1P22736 598 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 ACP1P24666 158 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 OMPP47874 163 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 NUDT6P53370 316 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 CXCR4P61073 352 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 FGFBP1Q14512 234 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 CLPPQ16740 277 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-207ENST00000436724 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPRF-207ENST00000436724 OVCH1Q7RTY7 1134 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 KIF18BQ86Y91 864 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 P3H2Q8IVL5 708 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 ZNF540Q8NDQ6 660 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 OR1N1Q8NGS0 311 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 GRHL3Q8TE85 626 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 ABTB1Q969K4 478 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-207ENST00000436724 PLA2G12AQ9BZM1 189 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 EGLN3Q9H6Z9 239 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 TESQ9UGI8 421 aaKnown RBP19.45■□□□□ 0.7
PTPRF-207ENST00000436724 KMT2EQ8IZD2 1858 aa19.45■□□□□ 0.7
PTPRF-207ENST00000436724 COL5A1P20908 1838 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-207ENST00000436724 ZNF99A8MXY4 864 aaPredicted RBP19.44■□□□□ 0.7
PTPRF-207ENST00000436724 MEN1O00255 615 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 FAM20BO75063 409 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 ACAA2P42765 397 aaKnown RBP19.44■□□□□ 0.7
PTPRF-207ENST00000436724 GPR4P46093 362 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 CDC42P60953 191 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 SLC35A2P78381 396 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 ALDH6A1Q02252 535 aaKnown RBP19.44■□□□□ 0.7
PTPRF-207ENST00000436724 CD300LDQ6UXZ3 194 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 ANKRD13BQ86YJ7 626 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 GATSQ8NAP1 163 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 PLEKHA8Q96JA3 519 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 DUSP21Q9H596 190 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 COPS7AQ9UBW8 275 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 ENPP5Q9UJA9 477 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 TTC36A6NLP5 189 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 CDX4O14627 284 aaPredicted RBP19.44■□□□□ 0.7
PTPRF-207ENST00000436724 FLRT2O43155 660 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 LYPD3O95274 346 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 ACVR2AP27037 513 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 COX10Q12887 443 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 IL11RAQ14626 422 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 FAM199XQ6PEV8 388 aaPredicted RBP19.44■□□□□ 0.7
PTPRF-207ENST00000436724 GRAMD2AQ8IUY3 354 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 DEPDC4Q8N2C3 294 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 IL4I1Q96RQ9 567 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.44■□□□□ 0.7
PTPRF-207ENST00000436724 TBC1D23Q9NUY8 699 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 RHBDL2Q9NX52 303 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 SCN3BQ9NY72 215 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 CFL2Q9Y281 166 aa19.44■□□□□ 0.7
PTPRF-207ENST00000436724 FRG2CA6NGY1 282 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 NR0B1P51843 470 aaKnown RBP19.43■□□□□ 0.7
PTPRF-207ENST00000436724 TRA2AQ13595 282 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPRF-207ENST00000436724 CTF1Q16619 201 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 TBC1D25Q3MII6 688 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 MBOAT2Q6ZWT7 520 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 ANKRD37Q7Z713 158 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 HEATR5AQ86XA9 2040 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 PIGXQ8TBF5 258 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 ADOQ96SZ5 270 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 TPRKBQ9Y3C4 175 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 CORINQ9Y5Q5 1042 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms