RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 DNAJB6O75190 326 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SLC2A10O95528 541 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NTN1O95631 604 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 LALBAP00709 142 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MAKP20794 623 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 F8A1P23610 371 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ACSL1P33121 698 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 GABRA3P34903 492 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SOX18P35713 384 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 DDOSTP39656 456 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CD79BP40259 229 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TGM4P49221 684 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SKP1P63208 163 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SHC2P98077 582 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ID2Q02363 134 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MGAT2Q10469 447 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 POU4F2Q12837 409 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 GALEQ14376 348 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TCEA2Q15560 299 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ZNHIT3Q15649 155 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 PRPF38BQ5VTL8 546 aaKnown RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 TRIQKQ629K1 86 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ARMC6Q6NXE6 501 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 PLBD1Q6P4A8 553 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 Q6ZSR6 202 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 KLBQ86Z14 1044 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 GRAMD2AQ8IUY3 354 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 GPALPP1Q8IXQ4 340 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ZFP41Q8N8Y5 198 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 C19orf18Q8NEA5 215 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 OR51G2Q8NGK0 314 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NEIL3Q8TAT5 605 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 HOXB13Q92826 284 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 TP53INP1Q96A56 240 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CTHRC1Q96CG8 243 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 BPIFA2Q96DR5 249 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ZNF486Q96H40 463 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 LRFN5Q96NI6 719 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CCDC3Q9BQI4 270 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ALG8Q9BVK2 526 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 IFT27Q9BW83 186 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 OR2B2Q9GZK3 357 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NEK6Q9HC98 313 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TRIM36Q9NQ86 728 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TRPV5Q9NQA5 729 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 HRASLS2Q9NWW9 162 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CLDND1Q9NY35 253 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 COMMD3Q9UBI1 195 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MRPS2Q9Y399 296 aaKnown RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 DOCK9Q9BZ29 2069 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 CENPVL1A0A0U1RR11 272 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 MEIOCA2RUB1 952 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 EPOPA6NHQ4 379 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 C12orf71A8MTZ7 269 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 PRAMEF26H0Y7S4 382 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 GTPBP1O00178 669 aaKnown RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 CHP2O43745 196 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 SSX4O60224 188 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 LDB3O75112 727 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 IFNGP01579 166 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 MT-ND5P03915 603 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 PRKAR1AP10644 381 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 PRG2P13727 222 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 HK1P19367 917 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 SLC6A6P31641 620 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 EVX1P49640 407 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 TPMTP51580 245 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 CCR5P51681 352 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 PSMD4P55036 377 aaKnown RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 SNRPNP63162 240 aaKnown RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 ACTC1P68032 377 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 ACTA1P68133 377 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 DAB2P98082 770 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 FOXK2Q01167 660 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 QPRTQ15274 297 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 TAB1Q15750 504 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 BCL2A1Q16548 175 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 CNIH2Q6PI25 160 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 ABI3BPQ7Z7G0 1075 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 SIRT6Q8N6T7 355 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 SYT14Q8NB59 555 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 OR4C6Q8NH72 309 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 PFN4Q8NHR9 129 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 ENKURQ8TC29 256 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 ADAMTS18Q8TE60 1221 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 ANKRD9Q96BM1 317 aaPredicted RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 ZC3HAV1LQ96H79 300 aaKnown RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 NEDD4LQ96PU5 975 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 SNX18Q96RF0 628 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 PHOX2BQ99453 314 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 LMF2Q9BU23 707 aaKnown RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 HDHD5Q9BXW7 423 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 C11orf54Q9H0W9 315 aaPredicted RBP9.66□□□□□ -0.86
CD44-210ENST00000434472 SLC28A3Q9HAS3 691 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 POU2F3Q9UKI9 436 aa9.66□□□□□ -0.86
CD44-210ENST00000434472 SIGLEC7Q9Y286 467 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms