RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SMYD1Q8NB12 490 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 LSM14AQ8ND56 463 aaKnown RBP10.05□□□□□ -0.8
CHD4-202ENST00000430771 FAM71CQ8NEG0 241 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 B4GALNT2Q8NHY0 566 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 PROX1Q92786 737 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 TTTY12Q9BZ98 90 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 PTGES2Q9H7Z7 377 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 GORASP2Q9H8Y8 452 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 ZFP64Q9NPA5 681 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 DEPPQ9NTK1 212 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 DNAJB12Q9NXW2 375 aaKnown RBP10.05□□□□□ -0.8
CHD4-202ENST00000430771 TUBA8Q9NY65 449 aaPredicted RBP10.05□□□□□ -0.8
CHD4-202ENST00000430771 DKKL1Q9UK85 242 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 SLC9A8Q9Y2E8 581 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 EML6Q6ZMW3 1958 aa10.05□□□□□ -0.8
CHD4-202ENST00000430771 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 CDHR4A6H8M9 788 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ERICH4A6NGS2 130 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 LRRC3CA6NJW4 275 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 CYP7B1O75881 506 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ZNF682O95780 498 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 SERPINA1P01009 418 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 CRYABP02511 175 aaKnown RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 C8BP07358 591 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 SLC6A8P48029 635 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 P2RX1P51575 399 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ZNF41P51814 821 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 RGS8P57771 180 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 ZNF117Q03924 483 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 DMTNQ08495 405 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 SKP2Q13309 424 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 CBFBQ13951 182 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 FLOT2Q14254 428 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 NADK2Q4G0N4 442 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 TIGD3Q6B0B8 471 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 PGM2L1Q6PCE3 622 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 FAM180AQ6UWF9 173 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 APOOLQ6UXV4 268 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 CBLL1Q75N03 491 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 FADS6Q8N9I5 356 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ZFP62Q8NB50 900 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 OR52E4Q8NGH9 312 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 NTNG2Q96CW9 530 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ZG16BQ96DA0 208 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 SH3YL1Q96HL8 342 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 LAT2Q9GZY6 243 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 PCDHAC1Q9H158 963 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 ZNF703Q9H7S9 590 aaPredicted RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 PROK2Q9HC23 129 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 OLAHQ9NV23 265 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 QPCTLQ9NXS2 382 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 TESQ9UGI8 421 aaKnown RBP10.04□□□□□ -0.8
CHD4-202ENST00000430771 SLC7A8Q9UHI5 535 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 C15orf41Q9Y2V0 281 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 CNTRLQ7Z7A1 2325 aa10.04□□□□□ -0.8
CHD4-202ENST00000430771 LOC400499M0QZD8 3231 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 ANKUB1A6NFN9 424 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 CFAP73A6NFT4 308 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 CLDN24A6NM45 220 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 ADAM10O14672 748 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 TFECO14948 347 aaPredicted RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 GCM2O75603 506 aaPredicted RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 CBR3O75828 277 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 NUDT14O95848 222 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 FESP07332 822 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 PGCP20142 388 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 CD247P20963 164 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 ATP6V1B2P21281 511 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 GDF1P27539 372 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 SRD5A2P31213 254 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 MSX2P35548 267 aaPredicted RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 GCKP35557 465 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 KCNJ5P48544 419 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 FOXO1Q12778 655 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 LY6DQ14210 128 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 HYAL4Q2M3T9 481 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 IFI44LQ53G44 452 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 C1orf146Q5VVC0 180 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 RANBP3LQ86VV4 465 aaPredicted RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 FAM109AQ8N4B1 249 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 WDSUB1Q8N9V3 476 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 OR2M3Q8NG83 312 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 OR5W2Q8NH69 310 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 GEMIN6Q8WXD5 167 aaKnown RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 TPD52L3Q96J77 140 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 HSH2DQ96JZ2 352 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 RTN4RQ9BZR6 473 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 DCAF13Q9NV06 445 aaKnown RBP10.03□□□□□ -0.8
CHD4-202ENST00000430771 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 POMPQ9Y244 141 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 CARD8Q9Y2G2 431 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 ITPR1Q14643 2758 aa10.03□□□□□ -0.8
CHD4-202ENST00000430771 A0A087WZY1 265 aa10.02□□□□□ -0.81
CHD4-202ENST00000430771 PINLYPA6NC86 204 aa10.02□□□□□ -0.81
CHD4-202ENST00000430771 C2orf72A6NCS6 295 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms