RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PIGUQ9H490 435 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 GP6Q9HCN6 339 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 TIGARQ9NQ88 270 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 MKS1Q9NXB0 559 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 A0A0J9YW62 118 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 GJE1A6NN92 205 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 H3BNH8 94 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 SCAMP2O15127 329 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 HMGN2P05204 90 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 FGF4P08620 206 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 LINGO3P0C6S8 592 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 LINC00032P0C843 101 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 BCKDHAP12694 445 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 ATP6V1C1P21283 382 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 CARD18P57730 90 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 LASP1Q14847 261 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 RNPS1Q15287 305 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 CD226Q15762 336 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 DDIASQ8IXT1 998 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 GSPT2Q8IYD1 628 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 LILRA2Q8N149 483 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 CIARTQ8N365 385 aaPredicted RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 NATD1Q8N6N6 113 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 ZNF611Q8N823 705 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 STEAP2Q8NFT2 490 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 POC1BQ8TC44 478 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 TWIST2Q8WVJ9 160 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 TMEM204Q9BSN7 226 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 HOXD1Q9GZZ0 328 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 C12orf65Q9H3J6 166 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 TMEM185BQ9H7F4 350 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 EML4Q9HC35 981 aaKnown RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 ZNF701Q9NV72 531 aaPredicted RBP13.3□□□□□ -0.28
MSH5-208ENST00000429846 BAIAP2L1Q9UHR4 511 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 ATP6V1HQ9UI12 483 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 ACTL7BQ9Y614 415 aa13.3□□□□□ -0.28
MSH5-208ENST00000429846 SMIM23A6NLE4 172 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 HS3ST1O14792 307 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 NPHS1O60500 1241 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 CNOT4O95628 575 aaKnown RBP13.29□□□□□ -0.28
MSH5-208ENST00000429846 KRT16P08779 473 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 NID1P14543 1247 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 ZNF117Q03924 483 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 FOXF1Q12946 379 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 CCNJQ5T5M9 372 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 CDC73Q6P1J9 531 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 C4orf33Q8N1A6 199 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 OR56A1Q8NGH5 318 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 PSMA8Q8TAA3 256 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 EPS8L3Q8TE67 593 aaKnown RBP13.29□□□□□ -0.28
MSH5-208ENST00000429846 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.28
MSH5-208ENST00000429846 OSTF1Q92882 214 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 PLPPR2Q96GM1 343 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 C16orf58Q96GQ5 468 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 APOPT1Q96IL0 206 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 PPP3R2Q96LZ3 170 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 USB1Q9BQ65 265 aaKnown RBP13.29□□□□□ -0.28
MSH5-208ENST00000429846 TACO1Q9BSH4 297 aaKnown RBP13.29□□□□□ -0.28
MSH5-208ENST00000429846 HDHD5Q9BXW7 423 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 ATAD3AQ9NVI7 634 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 FBXO34Q9NWN3 711 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 KLHL13Q9P2N7 655 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 SNX8Q9Y5X2 465 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
MSH5-208ENST00000429846 JMJD1CQ15652 2540 aa13.29□□□□□ -0.28
MSH5-208ENST00000429846 CSPG4Q6UVK1 2322 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 TRIM64A6NGJ6 449 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 TRIM64BA6NI03 449 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 SMAD7O15105 426 aaKnown RBP13.28□□□□□ -0.28
MSH5-208ENST00000429846 LYPLA1O75608 230 aaPredicted RBP13.28□□□□□ -0.28
MSH5-208ENST00000429846 OPN1LWP04000 364 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 SFTPDP35247 375 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 P2RX1P51575 399 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 UGT3A2Q3SY77 523 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 ADAM5Q6NVV9 412 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 WFDC8Q8IUA0 241 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 PHOSPHO1Q8TCT1 267 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 CDS1Q92903 461 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 MOAP1Q96BY2 351 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 OTUB1Q96FW1 271 aaPredicted RBP13.28□□□□□ -0.28
MSH5-208ENST00000429846 ACTRT3Q9BYD9 372 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 C12orf49Q9H741 205 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 NGBQ9NPG2 151 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 ICAM5Q9UMF0 924 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 FAF1Q9UNN5 650 aaPredicted RBP13.28□□□□□ -0.28
MSH5-208ENST00000429846 TRAF6Q9Y4K3 522 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 USF3Q68DE3 2245 aa13.28□□□□□ -0.28
MSH5-208ENST00000429846 PIP5K1BO14986 540 aa13.27□□□□□ -0.29
MSH5-208ENST00000429846 GCM2O75603 506 aaPredicted RBP13.27□□□□□ -0.29
MSH5-208ENST00000429846 NUDT14O95848 222 aa13.27□□□□□ -0.29
MSH5-208ENST00000429846 CHRNGP07510 517 aa13.27□□□□□ -0.29
MSH5-208ENST00000429846 EFNA1P20827 205 aaPredicted RBP13.27□□□□□ -0.29
MSH5-208ENST00000429846 SERPINB5P36952 375 aa13.27□□□□□ -0.29
MSH5-208ENST00000429846 CCT3P49368 545 aaKnown RBP13.27□□□□□ -0.29
MSH5-208ENST00000429846 PPP2R2BQ00005 443 aa13.27□□□□□ -0.29
MSH5-208ENST00000429846 SELENBP1Q13228 472 aa13.27□□□□□ -0.29
MSH5-208ENST00000429846 TP53BP2Q13625 1128 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms