RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ZIM2Q9NZV7 527 aa8.14□□□□□ -1.11
NUP98-207ENST00000429801 PURGQ9UJV8 347 aaKnown RBP8.14□□□□□ -1.11
NUP98-207ENST00000429801 MMACHCQ9Y4U1 282 aa8.14□□□□□ -1.11
NUP98-207ENST00000429801 U3KQA8 63 aa8.14□□□□□ -1.11
NUP98-207ENST00000429801 CABIN1Q9Y6J0 2220 aa8.14□□□□□ -1.11
NUP98-207ENST00000429801 TEX46H3BTG2 121 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 ETHE1O95571 254 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 C9P02748 559 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SERPIND1P05546 499 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 PRPS2P11908 318 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 PVRP15151 417 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CD1CP29017 333 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 TAGLN2P37802 199 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 SLC1A3P43003 542 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 MRPL19P49406 292 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 ATP12AP54707 1039 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 UGT2B15P54855 530 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 DIO3P55073 304 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SQSTM1Q13501 440 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 PWP1Q13610 501 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 TMEM35AQ53FP2 167 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 KHDRBS2Q5VWX1 349 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 FRMPD2BQ6IN97 320 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 OVCH2Q7RTZ1 564 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 GPR155Q7Z3F1 870 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 COMTD1Q86VU5 262 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 ZNF655Q8N720 491 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 C19orf47Q8N9M1 422 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 OR1M1Q8NGA1 313 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 IFI44Q8TCB0 444 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CHTF18Q8WVB6 975 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CPNE4Q96A23 557 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 RERGQ96A58 199 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 PPM1MQ96MI6 270 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 DPYSL5Q9BPU6 564 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 MS4A8Q9BY19 250 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SDR39U1Q9NRG7 319 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 ERVK13-1Q9NX77 482 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 NCDNQ9UBB6 729 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 PILRAQ9UKJ1 303 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 PRPF19Q9UMS4 504 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 NDUFAF1Q9Y375 327 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 FKBP7Q9Y680 259 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 FRYLO94915 3013 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 NDUFS4O43181 175 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CBR3O75828 277 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CFDP00746 253 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 SLC35G6P0C7Q6 338 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SPP1P10451 314 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 ST6GAL1P15907 406 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 IL7RP16871 459 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 RAB3BP20337 219 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 NBL1P41271 181 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 GFERP55789 205 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 GLO1Q04760 184 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SPEM2Q0P670 501 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 KLF10Q13118 480 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SNTB1Q13884 538 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 FGFBP1Q14512 234 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SF3A2Q15428 464 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 FAM189A2Q15884 450 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CSRP2Q16527 193 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.13□□□□□ -1.11
NUP98-207ENST00000429801 CYBRD1Q53TN4 286 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 NOXRED1Q6NXP6 359 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 UNQ6494/PRO21346Q6UXR6 183 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 ZNF782Q6ZMW2 699 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 RNF44Q7L0R7 432 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 R3HCC1LQ7Z5L2 792 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 FJX1Q86VR8 437 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 WDR36Q8NI36 951 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 MISP3Q96FF7 219 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 CLUHP3Q96NS8 147 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 OR2A5Q96R48 311 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 TREX2Q9BQ50 279 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 CCDC3Q9BQI4 270 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 DPCDQ9BVM2 203 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 SLC22A4Q9H015 551 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 DDX31Q9H8H2 851 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 UNKLQ9H9P5 680 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 TMEM9BQ9NQ34 198 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 SEMA4GQ9NTN9 838 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 C14orf105Q9NVL8 296 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 TMEM45AQ9NWC5 275 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 PAK1IP1Q9NWT1 392 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 MYEF2Q9P2K5 600 aaKnown RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 AASSQ9UDR5 926 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 POLR3HQ9Y535 204 aaPredicted RBP8.13□□□□□ -1.11
NUP98-207ENST00000429801 GPR45Q9Y5Y3 372 aa8.13□□□□□ -1.11
NUP98-207ENST00000429801 C9orf170A2RU37 121 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 LRIT2A6NDA9 550 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 URADA6NGE7 173 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SELENOFO60613 162 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 CTSVO60911 334 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SH3BGRLO75368 114 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 QDPRP09417 244 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 H2AFB1P0C5Y9 115 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 H2AFB2P0C5Z0 115 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 G6PDP11413 515 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms