RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NID1P14543 1247 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 ETS2P15036 469 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 GNLYP22749 145 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 PSME3P61289 254 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 ARHGAP11AQ6P4F7 1023 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 ARSKQ6UWY0 536 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 OR14L1PQ8NHC6 308 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 NEIL3Q8TAT5 605 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 WDR60Q8WVS4 1066 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 NSL1Q96IY1 281 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 LAT2Q9GZY6 243 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 ANGPT4Q9Y264 503 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 CCT8L1PA6NM43 557 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 UQCRFS1P47985 274 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 P2RX1P51575 399 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 SLC7A2P52569 658 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 PLAURQ03405 335 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 SKP2Q13309 424 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 GANABQ14697 944 aaKnown RBP22.22■■□□□ 1.15
VEGFA-209ENST00000425836 VMACQ2NL98 169 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 CMIPQ8IY22 773 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 FAM71CQ8NEG0 241 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 FBXO27Q8NI29 283 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 REXO5Q96IC2 774 aaKnown RBP22.22■■□□□ 1.15
VEGFA-209ENST00000425836 EXO5Q9H790 373 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 USP22Q9UPT9 525 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 AP3M1Q9Y2T2 418 aa22.22■■□□□ 1.15
VEGFA-209ENST00000425836 CYP7B1O75881 506 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 UBTFL6P0CB48 400 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 ESRRAP11474 423 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 HK1P19367 917 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 AQP1P29972 269 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 PCGF2P35227 344 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 ELOAQ14241 798 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 TRPM8Q7Z2W7 1104 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 SPRR3Q9UBC9 169 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF443Q9Y2A4 671 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 SLC6A5Q9Y345 797 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 IFT52Q9Y366 437 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 GPC6Q9Y625 555 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 PRRC2CQ9Y520 2896 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 NME4O00746 187 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 AQP7O14520 342 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 GCM2O75603 506 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 THBS1P07996 1170 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 TCEA1P23193 301 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 PCBP3P57721 371 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 LARS2Q15031 903 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 LIN52Q52LA3 116 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 KRT73Q86Y46 540 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 SLC30A8Q8IWU4 369 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 OR5W2Q8NH69 310 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 CNOT9Q92600 299 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 RSPO3Q9BXY4 272 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 MED17Q9NVC6 651 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 RLIMQ9NVW2 624 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 GMPR2Q9P2T1 348 aaKnown RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF232Q9UNY5 417 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 RPH3AQ9Y2J0 694 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF835Q9Y2P0 537 aa22.21■■□□□ 1.15
VEGFA-209ENST00000425836 PABPC4LP0CB38 370 aaKnown RBP22.2■■□□□ 1.14
VEGFA-209ENST00000425836 T-ENOLP0DO92 83 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 PTGS2P35354 604 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 MNAT1P51948 309 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 SUMO3P55854 103 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-209ENST00000425836 EEF1A1P68104 462 aaKnown RBP22.2■■□□□ 1.14
VEGFA-209ENST00000425836 LIPEQ05469 1076 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 RBPJQ06330 500 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 ZNF311Q5JNZ3 666 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 MRPL2Q5T653 305 aaKnown RBP22.2■■□□□ 1.14
VEGFA-209ENST00000425836 ZNF836Q6ZNA1 936 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 TMCO5AQ8N6Q1 288 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 TOR1AIP2Q8NFQ8 470 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 GPR119Q8TDV5 335 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 ZNF607Q96SK3 696 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 CACYBPQ9HB71 228 aaKnown RBP22.2■■□□□ 1.14
VEGFA-209ENST00000425836 DNAJB12Q9NXW2 375 aaKnown RBP22.2■■□□□ 1.14
VEGFA-209ENST00000425836 ABCD2Q9UBJ2 740 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 TNFRSF10DQ9UBN6 386 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 VDAC3Q9Y277 283 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 CHST2Q9Y4C5 530 aa22.2■■□□□ 1.14
VEGFA-209ENST00000425836 A0A087WZY1 265 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 FAM220BPB1ANY3 271 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 NPIPA2E9PIF3 369 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 NPIPA3F8WFD2 350 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 J3QKU1 62 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 B3GALT5-AS1P59052 145 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 SLC25A3Q00325 362 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 EIF2S3LQ2VIR3 472 aaKnown RBP22.19■■□□□ 1.14
VEGFA-209ENST00000425836 GLYR1Q49A26 553 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-209ENST00000425836 ERICH5Q6P6B1 374 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 IFNEQ86WN2 208 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 CLIP4Q8N3C7 705 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 OR2T12Q8NG77 320 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 ZNF524Q96C55 264 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 ARSGQ96EG1 525 aa22.19■■□□□ 1.14
VEGFA-209ENST00000425836 EXOSC3Q9NQT5 275 aaKnown RBP22.19■■□□□ 1.14
VEGFA-209ENST00000425836 CDHR4A6H8M9 788 aa22.18■■□□□ 1.14
VEGFA-209ENST00000425836 OR14I1A6ND48 311 aa22.18■■□□□ 1.14
VEGFA-209ENST00000425836 SLC19A2O60779 497 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms