RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF225Q9UK10 706 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 POLR3HQ9Y535 204 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GXYLT2A0PJZ3 443 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CCT5P48643 541 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 P2RX1P51575 399 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SUMO3P55854 103 aaPredicted RBP10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CHRNB3Q05901 458 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PLPPR5Q32ZL2 321 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM176BQ3YBM2 270 aaPredicted RBP10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 LRIG3Q6UXM1 1119 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TRIM46Q7Z4K8 759 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TDRPQ86YL5 185 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF619Q8N2I2 560 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NATD1Q8N6N6 113 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CCDC63Q8NA47 563 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ATP6V1C2Q8NEY4 427 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TOR1AIP2Q8NFQ8 470 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZHX1-C8orf76Q96EF9 292 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ADGRG7Q96K78 797 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MS4A4EQ96PG1 132 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM237Q96Q45 408 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RTN4RQ9BZR6 473 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ACSS1Q9NUB1 689 aaPredicted RBP10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MAGED1Q9Y5V3 778 aaPredicted RBP10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PMF1-BGLAPU3KQ54 211 aa10.92□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CIB4A0PJX0 185 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 C17orf51A8MQB3 221 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 HAX1O00165 279 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ADAM11O75078 769 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KCNK2O95069 426 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PSMG1O95456 288 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 C8BP07358 591 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SOD3P08294 240 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 DANCRP0C864 163 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 UROSP10746 265 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLC25A16P16260 332 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GGT1P19440 569 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ENPP1P22413 925 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ASMTP46597 345 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 HTR6P50406 440 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RAC3P60763 192 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RASGEF1BQ0VAM2 473 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF239Q16600 458 aaKnown RBP10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ARL13AQ5H913 290 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TIMM23BQ5SRD1 257 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CYB5R2Q6BCY4 276 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 BHLHB9Q6PI77 547 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TFAP2EQ6VUC0 442 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 Q6ZT83 130 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF551Q7Z340 670 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GABRG1Q8N1C3 465 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 UBE2J2Q8N2K1 259 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PIAS4Q8N2W9 510 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM151AQ8N4L1 468 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ADAMTS15Q8TE58 950 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RNF128Q8TEB7 428 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MTERF3Q96E29 417 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PRPF18Q99633 342 aaKnown RBP10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 BTBD2Q9BX70 525 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SHARPINQ9H0F6 387 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 REEP4Q9H6H4 257 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 C1orf109Q9NX04 203 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 EMC3Q9P0I2 261 aa10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FAF1Q9UNN5 650 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CCT8L1PA6NM43 557 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM114B3SHH9 223 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 UBFD1O14562 309 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GCM2O75603 506 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 URI1O94763 535 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CSF3P09919 207 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SBK3P0C264 359 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NEFHP12036 1026 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 HNF1AP20823 631 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PTAFRP25105 342 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MAPK1P28482 360 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CDH11P55287 796 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CSNK2A1P68400 391 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 LSM12Q3MHD2 195 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CCDC153Q494R4 210 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SPDYE7PQ495Y7 208 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 LIPNQ5VXI9 398 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLC22A25Q6T423 547 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 APOOLQ6UXV4 268 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF572Q7Z3I7 529 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NUFIP2Q7Z417 695 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GALNT5Q7Z7M9 940 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FBXO27Q8NI29 283 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FAM110BQ8TC76 370 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ABHD3Q8WU67 409 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM234Q8WY98 164 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF764Q96H86 408 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MRGPRX4Q96LA9 322 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TNFRSF13CQ96RJ3 184 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 STACQ99469 402 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TRAF4Q9BUZ4 470 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CBLN4Q9NTU7 201 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZCCHC3Q9NUD5 404 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms