RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 AVPR2P30518 371 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 DCDP81605 110 aaKnown RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 ZNF385CQ66K41 422 aaPredicted RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 TEX47Q8TBZ9 253 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 RNF217Q8TC41 542 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 TMEM239Q8WW34 195 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 C12orf43Q96C57 262 aaKnown RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 GAL3ST4Q96RP7 486 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 A0A0B4J2E0 115 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 C2orf92A0A1B0GVN3 265 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 A0A1B0GX12 115 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 CDK1P06493 297 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 PCSK6P29122 969 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 EBPQ15125 230 aaKnown RBP24.41■■□□□ 1.5
LDB1-202ENST00000425280 KLHL26Q53HC5 615 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 TMEM201Q5SNT2 666 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 CCDC81Q6ZN84 652 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 TCEANCQ8N8B7 351 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 OR8J1Q8NGP2 316 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 OR1N1Q8NGS0 311 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 GRHL3Q8TE85 626 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 ATOH1Q92858 354 aaPredicted RBP24.41■■□□□ 1.5
LDB1-202ENST00000425280 DOK1Q99704 481 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 KRCC1Q9NPI7 259 aaPredicted RBP24.41■■□□□ 1.5
LDB1-202ENST00000425280 ACOT13Q9NPJ3 140 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 A0A1B0GWA3 101 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 ENTPD6O75354 484 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 C21orf33P30042 268 aaPredicted RBP24.41■■□□□ 1.5
LDB1-202ENST00000425280 SMSP52788 366 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 NDUFAF6Q330K2 333 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 ZNF550Q7Z398 422 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 ALDH16A1Q8IZ83 802 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 RNF113BQ8IZP6 322 aaKnown RBP24.41■■□□□ 1.5
LDB1-202ENST00000425280 B3GNT7Q8NFL0 401 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 PFN4Q8NHR9 129 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 RORBQ92753 470 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 PHOX2BQ99453 314 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 TRIM2Q9C040 744 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 LIN28AQ9H9Z2 209 aaKnown RBP24.41■■□□□ 1.5
LDB1-202ENST00000425280 SELENONQ9NZV5 590 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 COPS7AQ9UBW8 275 aa24.41■■□□□ 1.5
LDB1-202ENST00000425280 MAN1A2O60476 641 aa24.4■■□□□ 1.5
LDB1-202ENST00000425280 CSTAP01040 98 aa24.4■■□□□ 1.5
LDB1-202ENST00000425280 HBQ1P09105 142 aa24.4■■□□□ 1.5
LDB1-202ENST00000425280 DCAF7P61962 342 aa24.4■■□□□ 1.5
LDB1-202ENST00000425280 MVKQ03426 396 aa24.4■■□□□ 1.5
LDB1-202ENST00000425280 POLDIP3Q9BY77 421 aaKnown RBP24.4■■□□□ 1.5
LDB1-202ENST00000425280 SYNDIG1LA6NDD5 238 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 EFCAB7A8K855 629 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 CDC42EP2O14613 210 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 PRKYO43930 277 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 ONECUT2O95948 504 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 CSTF2P33240 577 aaKnown RBP eCLIP24.39■■□□□ 1.5
LDB1-202ENST00000425280 PCYT1AP49585 367 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 LSMEM1Q8N8F7 131 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 CTRCQ99895 268 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 NRSN2Q9GZP1 204 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 HOXD1Q9GZZ0 328 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 UBQLN4Q9NRR5 601 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 DNAJC27Q9NZQ0 273 aa24.39■■□□□ 1.5
LDB1-202ENST00000425280 KHNYNO15037 678 aaKnown RBP24.39■■□□□ 1.49
LDB1-202ENST00000425280 CHP2O43745 196 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 STSP08842 583 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 ZNF883P0CG24 379 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 FGF5P12034 268 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 ACVR2AP27037 513 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 ZFP36L1Q07352 338 aaKnown RBP24.39■■□□□ 1.49
LDB1-202ENST00000425280 SLC27A4Q6P1M0 643 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 OVCH1Q7RTY7 1134 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 MRGPREQ86SM8 312 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 Q96MT0 163 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 WWTR1Q9GZV5 400 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 IL20Q9NYY1 176 aa24.39■■□□□ 1.49
LDB1-202ENST00000425280 IDSB3KWA1 339 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 H3BMQ9 156 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 HEXBP07686 556 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 PEX19P40855 299 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 GRK6P43250 576 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 EFNB1P98172 346 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 PRKCDQ05655 676 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 ST3GAL4Q11206 333 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 TRA2AQ13595 282 aaKnown RBP eCLIP24.38■■□□□ 1.49
LDB1-202ENST00000425280 ZNF620Q6ZNG0 422 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 PRR22Q8IZ63 422 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 MPP4Q96JB8 637 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 COG8Q96MW5 612 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 C20orf141Q9NUB4 165 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 WARS2Q9UGM6 360 aaKnown RBP24.38■■□□□ 1.49
LDB1-202ENST00000425280 SLC35A3Q9Y2D2 325 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 FRYLO94915 3013 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 IGHV3-20A0A0C4DH32 117 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 GDF9O60383 454 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 UTS2O95399 124 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 LDOC1O95751 146 aaPredicted RBP24.38■■□□□ 1.49
LDB1-202ENST00000425280 SLC15A1P46059 708 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 OCLNQ16625 522 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 FNDC7Q5VTL7 733 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 HLA-DQA1Q5Y7H0 255 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 DBX2Q6ZNG2 339 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 ANKRD37Q7Z713 158 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms