RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 CCDC68Q9H2F9 335 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ADAP2Q9NPF8 381 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FANCFQ9NPI8 374 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SNX15Q9NRS6 342 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAIMQ9NVQ4 179 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 CNIH4Q9P003 139 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 COPS7AQ9UBW8 275 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF148Q9UQR1 794 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SLC6A5Q9Y345 797 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 IGHV4-30-2A0A087WSY4 118 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 IGKV3D-11A0A0A0MRZ8 115 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 SYCE3A1L190 88 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 OR51F1A6NGY5 319 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 HACD1B0YJ81 288 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PRMT5O14744 637 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PRKNO60260 465 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 CEP104O60308 925 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 CST8O60676 142 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PROSCO94903 275 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ACSL3O95573 720 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 SLC16A8O95907 504 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ACTL6AO96019 429 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 C1QAP02745 245 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 TNNT1P13805 278 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 SLC25A16P16260 332 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 FOXN2P32314 431 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ADRA1AP35348 466 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PAFAH1B1P43034 410 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 COMPP49747 757 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 EIF3BP55884 814 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 P2RX3P56373 397 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PRAMEP78395 509 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 SF3A3Q12874 501 aaKnown RBP eCLIP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 MSLNQ13421 630 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 GALNTL6Q49A17 601 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 OR2A2Q6IF42 318 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 AFTPHQ6ULP2 937 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 R3HCC1LQ7Z5L2 792 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 KRT77Q7Z794 578 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 GALNT5Q7Z7M9 940 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 CCDC50Q8IVM0 306 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 DND1Q8IYX4 353 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 LRRC17Q8N6Y2 441 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF740Q8NDX6 193 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 MCUQ8NE86 351 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 OR4L1Q8NH43 312 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 OR8K3Q8NH51 312 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PAQR8Q8TEZ7 354 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 WIPF2Q8TF74 440 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 SMAP2Q8WU79 429 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ANKRD9Q96BM1 317 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 TM4SF19Q96DZ7 209 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 WDYHV1Q96HA8 205 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ADAD1Q96M93 576 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 RUNDC3BQ96NL0 473 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ERGIC2Q96RQ1 377 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 NTMT1Q9BV86 223 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 UGT2B28Q9BY64 529 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 TRIM5Q9C035 493 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 OR8D2Q9GZM6 311 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PCBD2Q9H0N5 130 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF696Q9H7X3 374 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 CLK4Q9HAZ1 481 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 EML4Q9HC35 981 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PRTFDC1Q9NRG1 225 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 LIN7CQ9NUP9 197 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 NKIRAS2Q9NYR9 191 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ARMCX1Q9P291 453 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF223Q9UK11 482 aaPredicted RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 BAG5Q9UL15 447 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 PPIEQ9UNP9 301 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
SFXN1-202ENST00000421887 MMACHCQ9Y4U1 282 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 WIF1Q9Y5W5 379 aa4.34□□□□□ -1.71
SFXN1-202ENST00000421887 MEGF8Q7Z7M0 2845 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 MGAM2Q2M2H8 2515 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 CCDC162PA2VCL2 907 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 SAC3D1A6NKF1 404 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 SLCO1B7G3V0H7 640 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 H7C0C1 242 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 GFYI3L273 518 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 TP53I11O14683 189 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 CLOCKO15516 846 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 OR1F1O43749 312 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 GOT2P00505 430 aaKnown RBP4.33□□□□□ -1.72
SFXN1-202ENST00000421887 PLAUP00749 431 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 SERPINC1P01008 464 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 HPNP05981 417 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 CRHP06850 196 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 SOD3P08294 240 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 CCDC166P0CW27 439 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 IGHV4-31P0DP07 118 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 ERGP11308 486 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 SKILP12757 684 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 TBXA2RP21731 343 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 USF1P22415 310 aaPredicted RBP4.33□□□□□ -1.72
SFXN1-202ENST00000421887 PSMB4P28070 264 aa4.33□□□□□ -1.72
SFXN1-202ENST00000421887 ABCD3P28288 659 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms