RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 HTR2AP28223 471 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 SHC1P29353 583 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 RHAGQ02094 409 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 GNA13Q14344 377 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 MINDY4Q4G0A6 757 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TP53I3Q53FA7 332 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 KLHL22Q53GT1 634 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 PAQR7Q86WK9 346 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 RFLNBQ8N5W9 214 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 OR2A5Q96R48 311 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 GAL3ST1Q99999 423 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 OR6C2Q9NZP2 312 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 ADAM18Q9Y3Q7 739 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 SIRT4Q9Y6E7 314 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 KNTC1P50748 2209 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 SLC9B1P1A6NJY1 282 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TAF4O00268 1085 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 DPM1O60762 260 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 PSMB10P40306 273 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 OMPP47874 163 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 SNRPD2P62316 118 aaKnown RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 FAAH2Q6GMR7 532 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 CCDC190Q86UF4 302 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 FAM26EQ8N5C1 309 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 KIAA1958Q8N8K9 716 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 ACOT11Q8WXI4 607 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 EFHD2Q96C19 240 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 RBM18Q96H35 190 aaKnown RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 CD180Q99467 661 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TAPBPLQ9BX59 468 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TEX12Q9BXU0 123 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 NEK6Q9HC98 313 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 HYKKA2RU49 373 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 RFPL3O75679 317 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 CHRNB1P11230 501 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TNFRSF17Q02223 184 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
MCF2L-213ENST00000421756 FCRL6Q6DN72 434 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 TMEM53Q6P2H8 277 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 ZFYVE21Q9BQ24 234 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 RAB11FIP5Q9BXF6 653 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 MPDZO75970 2070 aa12.4□□□□□ -0.42
MCF2L-213ENST00000421756 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 ADAM11O75078 769 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 OR12D2P58182 307 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 CDK5Q00535 292 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 E2F1Q01094 437 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 CRMP1Q14194 572 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 PGGHGQ32M88 737 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 AMZ1Q400G9 498 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 NKAIN2Q5VXU1 208 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 Q8N402 240 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 GCDHQ92947 438 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 GAL3ST3Q96A11 431 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 GIMAP5Q96F15 307 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 MS4A4EQ96PG1 132 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 BCL7BQ9BQE9 202 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 NRSN2Q9GZP1 204 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 MIXL1Q9H2W2 232 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 RANGRFQ9HD47 186 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 SIDT1Q9NXL6 827 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 TAS2R7Q9NYW3 318 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 UGT2A1Q9Y4X1 527 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 CCDC182A6NF36 153 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 C5orf67F2Z3F1 127 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 BLOC1S5-TXNDC5H3BN57 136 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 KHNYNO15037 678 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 RPP14O95059 124 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 FRKP42685 505 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 CENPAP49450 140 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 PSPHP78330 225 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 PRKCDQ05655 676 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 COX10Q12887 443 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 ELOAQ14241 798 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 KCNAB1Q14722 419 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 NFATC4Q14934 902 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF425Q6IV72 752 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 OAFQ86UD1 273 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 OOSP2Q86WS3 158 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 RAB43Q86YS6 212 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 TMEM239Q8WW34 195 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 NDUFB11Q9NX14 153 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 CD207Q9UJ71 328 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 ADAM29Q9UKF5 820 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 DIMT1Q9UNQ2 313 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 ALPK3Q96L96 1907 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 HEATR5AQ86XA9 2040 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 SNTNA6NMZ2 147 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 GABRPO00591 440 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 EMDP50402 254 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 RPS15AP62244 130 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 ABATP80404 500 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 HHEXQ03014 270 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms