RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SLC26A2P50443 739 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 DAOAP59103 153 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 CDR2Q01850 454 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 ITGA9Q13797 1035 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 KLF5Q13887 457 aaPredicted RBP2.27□□□□□ -2.05
MCF2-204ENST00000414978 TMEM44Q2T9K0 475 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 HIKESHIQ53FT3 197 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 MARCH8Q5T0T0 291 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 DHRS11Q6UWP2 260 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 TMEM207Q6UWW9 146 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 ASB18Q6ZVZ8 466 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 GLCCI1Q86VQ1 547 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 GCNT2Q8N0V5 402 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 ELMOD1Q8N336 334 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 CPSF7Q8N684 471 aaKnown RBP2.27□□□□□ -2.05
MCF2-204ENST00000414978 MDS2Q8NDY4 140 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 TMEM131Q92545 1883 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 C18orf25Q96B23 403 aaPredicted RBP2.27□□□□□ -2.05
MCF2-204ENST00000414978 DHX58Q96C10 678 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 RASD2Q96D21 266 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 DOCK6Q96HP0 2047 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 SENP8Q96LD8 212 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 AMDHD1Q96NU7 426 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 VPS35Q96QK1 796 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 FBXO44Q9H4M3 255 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 PSTPIP2Q9H939 334 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 ANKRA2Q9H9E1 313 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 MRPL47Q9HD33 250 aaKnown RBP2.27□□□□□ -2.05
MCF2-204ENST00000414978 GPR173Q9NS66 373 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 STOX2Q9P2F5 926 aaPredicted RBP2.27□□□□□ -2.05
MCF2-204ENST00000414978 ZNF639Q9UID6 485 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 SIX4Q9UIU6 781 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 SLC7A7Q9UM01 511 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 KLHDC2Q9Y2U9 406 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 SCN8AQ9UQD0 1980 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 UNC79Q9P2D8 2635 aa2.27□□□□□ -2.05
MCF2-204ENST00000414978 ATRXP46100 2492 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NFASCO94856 1347 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TRAV24A0A0B4J272 114 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ZCWPW2A0A1B0GU75 182 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 VGLL3A8MV65 326 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 EIF3HO15372 352 aaKnown RBP eCLIP2.26□□□□□ -2.05
MCF2-204ENST00000414978 EXTL3O43909 919 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NDUFS6O75380 124 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 SMC2O95347 1197 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SFTPBP07988 381 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 PNMTP11086 282 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 HOXA5P20719 270 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CHI3L1P36222 383 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 LONP1P36776 959 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 RPS6P62753 249 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 UBE2IP63279 158 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 ORC2Q13416 577 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 PNOCQ13519 176 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 GTF2H2Q13888 395 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SF3A2Q15428 464 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 QRICH1Q2TAL8 776 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 LRRC23Q53EV4 343 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 TEX44Q53QW1 395 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SLX4IPQ5VYV7 408 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 GTF2H2CQ6P1K8 395 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 LINGO4Q6UY18 593 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NANOGNBQ7Z5D8 188 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RALGPS2Q86X27 583 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 ECHDC2Q86YB7 292 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 OR5D13Q8NGL4 314 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 OR4C3Q8NH37 302 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TBCKQ8TEA7 893 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RNF138Q8WVD3 245 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 C17orf50Q8WW18 174 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NEUROG1Q92886 237 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TIMD4Q96H15 378 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 URB1-AS1Q96HZ7 61 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ELMO2Q96JJ3 720 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 INPP4AQ96PE3 977 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 TSSK2Q96PF2 358 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TSSK3Q96PN8 268 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ARRDC1-AS1Q9H2J1 176 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TBC1D13Q9NVG8 400 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TAAR2Q9P1P5 351 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 C11orf21Q9P2W6 132 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 MYO6Q9UM54 1294 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 MEMO1Q9Y316 297 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SLC6A5Q9Y345 797 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ANAPC1Q9H1A4 1944 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 MYH10P35580 1976 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NPIPA5A0A0B4J1W7 369 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 LINC01548A6NM66 108 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NPIPA5E9PKD4 350 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NPIPA3F8WFD2 350 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 EPHB6O15197 1021 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RGS16O15492 202 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 LRRTM2O43300 516 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 KRT33AO76009 404 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 F10P00742 488 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 UMODP07911 640 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TPM1P09493 284 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ZNF286BP0CG31 522 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 STAG3L3P0CL85 134 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 HOXB2P14652 356 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms