RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 FGFBP1Q14512 234 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ZNF585AQ6P3V2 769 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 SNX32Q86XE0 403 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 GTPBP8Q8N3Z3 284 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-206ENST00000414829 MEIOBQ8N635 442 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ANKFN1Q8N957 763 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 OR8J3Q8NGG0 315 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 OR5W2Q8NH69 310 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 SLC38A5Q8WUX1 472 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 WDR60Q8WVS4 1066 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 TMEM234Q8WY98 164 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ARSGQ96EG1 525 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 SH3YL1Q96HL8 342 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 TIMP4Q99727 224 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 TREX2Q9BQ50 279 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-206ENST00000414829 THUMPD3Q9BV44 507 aaKnown RBP13.28□□□□□ -0.28
LIMS1-206ENST00000414829 SPATA5L1Q9BVQ7 753 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 UGT2B28Q9BY64 529 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 RTN4RQ9BZR6 473 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 LAT2Q9GZY6 243 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 BCL2L10Q9HD36 194 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 MED17Q9NVC6 651 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ZNF232Q9UNY5 417 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ANGPT4Q9Y264 503 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ARL2BPQ9Y2Y0 163 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 SLC6A5Q9Y345 797 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 L3MBTL1Q9Y468 752 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 AP4B1Q9Y6B7 739 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ESPL1Q14674 2120 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.28
LIMS1-206ENST00000414829 NPIPA5A0A0B4J1W7 369 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 GJE1A6NN92 205 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 NPIPA7E9PJI5 369 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 H0Y3Z8 333 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 NDUFAB1O14561 156 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 ZIC3O60481 467 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 SEMA7AO75326 666 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 WISP2O76076 250 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 LDLRP01130 860 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 NPIPA8P0DM63 369 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 NID1P14543 1247 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 ETS2P15036 469 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 PGCP20142 388 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 RPS4Y1P22090 263 aaKnown RBP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 SLC6A2P23975 617 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 CCR4P51679 360 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 KCNJ10P78508 379 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 CHRNEQ04844 493 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 SKP2Q13309 424 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 SYPL1Q16563 259 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 PLPPR5Q32ZL2 321 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 CHMP1BQ7LBR1 199 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 LACC1Q8IV20 430 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 ULK2Q8IYT8 1036 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 ZNF808Q8N4W9 903 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 C11orf65Q8NCR3 313 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 BHLHE22Q8NFJ8 381 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 ST8SIA1Q92185 356 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 RND1Q92730 232 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 TMEM19Q96HH6 336 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 MRGPRX4Q96LA9 322 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 PNPLA3Q9NST1 481 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 ICAM5Q9UMF0 924 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 CAMK2AQ9UQM7 478 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 CARD8Q9Y2G2 431 aa13.27□□□□□ -0.29
LIMS1-206ENST00000414829 RPH3AQ9Y2J0 694 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 UBR5O95071 2799 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-206ENST00000414829 PRORSD1PA6NEY8 169 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 ZIC2O95409 532 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 ARAFP10398 606 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 PRDX6P30041 224 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 GYS2P54840 703 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 RPS3AP61247 264 aaKnown RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 CDK6Q00534 326 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 RUNDC3AQ59EK9 446 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 INTS11Q5TA45 600 aaKnown RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 GKAP1Q5VSY0 366 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 REEP3Q6NUK4 255 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 SERPINA11Q86U17 422 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 MTDHQ86UE4 582 aaKnown RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 RETREG3Q86VR2 466 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 HIPK4Q8NE63 616 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 ZPLD1Q8TCW7 415 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms