RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FAM27D1Q5T7N8 215 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 RPL13AP3Q6NVV1 102 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 OR4N4Q8N0Y3 316 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 OR10H4Q8NGA5 316 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 FANK1Q8TC84 345 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 OR8D1Q8WZ84 308 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 DPCDQ9BVM2 203 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-202ENST00000413219 LRRN3Q9H3W5 708 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 ZCCHC4Q9H5U6 513 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 MTHFD2LQ9H903 347 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-202ENST00000413219 CACYBPQ9HB71 228 aaKnown RBP16.4■□□□□ 0.22
SDCBP-202ENST00000413219 EQTNQ9NQ60 294 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 SLC7A7Q9UM01 511 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 TMEM5Q9Y2B1 443 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 FKBP7Q9Y680 259 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 A0A1B0GVC2 190 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 A6NIN4 97 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 AGR2O95994 175 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 CD3GP09693 182 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 SLC35G4P0C7Q5 338 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 TBXA2RP21731 343 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF81P51508 661 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 NRG3P56975 720 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 FGFBP1Q14512 234 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 POU4F3Q15319 338 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 AANATQ16613 207 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 SLC25A35Q3KQZ1 300 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 FRRS1Q6ZNA5 592 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 FAM20CQ8IXL6 584 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 RNF113BQ8IZP6 322 aaKnown RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 RPLP0P6Q8NHW5 317 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 GIMAP1Q8WWP7 306 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 NACC2Q96BF6 587 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 GIMAP5Q96F15 307 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 HS6ST2Q96MM7 605 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 TBX5Q99593 518 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 MFRPQ9BY79 579 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 CMC2Q9NRP2 79 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF223Q9UK11 482 aaPredicted RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 CAMK2AQ9UQM7 478 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 TCF20Q9UGU0 1960 aaKnown RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 FAM86C2PA6NEL3 165 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 C4orf51C9J302 202 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 E9PI62 339 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ADH1AP07327 375 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 C8orf89P0DMQ9 161 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 RRASP10301 218 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ENPP1P22413 925 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 BCL6P41182 706 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 TSFMP43897 325 aaKnown RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 PDX1P52945 283 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ERVK-21P61565 698 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 DGCR2P98153 550 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 E2F1Q01094 437 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 SLC3A1Q07837 685 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 PUS10Q3MIT2 529 aaKnown RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 EIPR1Q53HC9 387 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 DMKNQ6E0U4 476 aaPredicted RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 RTL4Q6ZR62 310 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 OR2L5Q8NG80 312 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 OR2A1Q8NGT9 310 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ADAMTS15Q8TE58 950 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 SLC35A4Q96G79 324 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 PGLYRP3Q96LB9 341 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF681Q96N22 645 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 CD180Q99467 661 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 TRMT61BQ9BVS5 477 aaKnown RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 MED20Q9H944 212 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 SIDT1Q9NXL6 827 aaKnown RBP16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ZMIZ1Q9ULJ6 1067 aa16.39■□□□□ 0.21
SDCBP-202ENST00000413219 ZC3H12DA2A288 527 aaKnown RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ANKRD61A6NGH8 418 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF593O00488 134 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 FCMRO60667 390 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ITGA10O75578 1167 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 RCBTB2O95199 551 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 MPC2O95563 127 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 SERPINA3P01011 423 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 BMP7P18075 431 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 FXYD6P3P58550 94 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 RAB14P61106 215 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 PUDPQ08623 228 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 BAMBIQ13145 260 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 KLF9Q13886 244 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ACSM3Q53FZ2 586 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 SRFBP1Q8NEF9 429 aaKnown RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 OR9A2Q8NGT5 310 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 SLC2A12Q8TD20 617 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ZFPM2Q8WW38 1151 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 CCDC120Q96HB5 630 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 CMTM3Q96MX0 182 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 TEAD3Q99594 435 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 PRSS27Q9BQR3 290 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 C1QTNF7Q9BXJ2 289 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 LYARQ9NX58 379 aaKnown RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 NTMQ9P121 344 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 MOSPD1Q9UJG1 213 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 TRAPPC13A5PLN9 417 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms