RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF735P0CB33 412 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 STAG3L3P0CL85 134 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DBTP11182 482 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 CTSEP14091 401 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 POU2F1P14859 743 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ANXA7P20073 488 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 CSRP1P21291 193 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 F8A1P23610 371 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 AZGP1P25311 298 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PTBP1P26599 531 aaKnown RBP eCLIP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 AK4P27144 223 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 BMI1P35226 326 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 HMGCLP35914 325 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 CDKN1AP38936 164 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 NR4A2P43354 598 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 STARP49675 285 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GZMKP49863 264 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SMSP52788 366 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 NKX2-5P52952 324 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 UBE2IP63279 158 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 B4GALNT1Q00973 533 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 FLI1Q01543 452 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PIGFQ07326 219 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DPTQ07507 201 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 LCP2Q13094 533 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ITGADQ13349 1161 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 KRR1Q13601 381 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 KCNJ11Q14654 390 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ARHGAP19Q14CB8 494 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TAF1AQ15573 450 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TRIP6Q15654 476 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SMN1Q16637 294 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 CYP1B1Q16678 543 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GCNT6Q5T4J0 391 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DHRS7BQ6IAN0 325 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GRHL2Q6ISB3 625 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PODNL1Q6PEZ8 512 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SLC16A12Q6ZSM3 486 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF534Q76KX8 674 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DET1Q7L5Y6 550 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 LRRC70Q7Z2Q7 622 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 RNF144BQ7Z419 303 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ASPGQ86U10 573 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SLC35F3Q8IY50 421 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 CLIP4Q8N3C7 705 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TRAM1L1Q8N609 369 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 RASGEF1AQ8N9B8 481 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SNX31Q8N9S9 440 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DNAAF3Q8N9W5 541 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM185AQ8NFB2 350 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 STEAP2Q8NFT2 490 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 OR52N1Q8NH53 320 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PNPT1Q8TCS8 783 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TCP10LQ8TDR4 215 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 C2CD4CQ8TF44 421 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PATE1Q8WXA2 126 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PIK3R3Q92569 461 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 UFD1Q92890 307 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GCDHQ92947 438 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GLYATL1Q969I3 302 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 NCLNQ969V3 563 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TMIGD2Q96BF3 282 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 MOAP1Q96BY2 351 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SNRNP40Q96DI7 357 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DCUN1D1Q96GG9 259 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SH3YL1Q96HL8 342 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 COX14Q96I36 57 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 APOLD1Q96LR9 279 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF597Q96LX8 424 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF778Q96MU6 729 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 OR2M4Q96R27 311 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TRIM51Q9BSJ1 452 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SLC19A3Q9BZV2 496 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 OR2AG1Q9H205 316 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SLC6A15Q9H2J7 730 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 FAM96AQ9H5X1 160 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ANKHQ9HCJ1 492 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SMOXQ9NWM0 555 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 IL17CQ9P0M4 197 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SLC2A6Q9UGQ3 507 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PCYOX1Q9UHG3 505 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GLS2Q9UI32 602 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 SLC17A4Q9Y2C5 497 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 MYRFQ9Y2G1 1151 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 MRPS7Q9Y2R9 242 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 RNF11Q9Y3C5 154 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 PKP3Q9Y446 797 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 HEMK1Q9Y5R4 338 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DMRT1Q9Y5R6 373 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 U3KQA8 63 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 TDRD6O60522 2096 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 AKAP13Q12802 2813 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CEP295Q9C0D2 2601 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ASPMQ8IZT6 3477 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 FAM149AA5PLN7 773 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 OR2AG2A6NM03 316 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LMO7DNF2Z398 122 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 NDUFS8O00217 210 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms