RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RTL6Q6ICC9 239 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 TREML1Q86YW5 311 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 FAM71CQ8NEG0 241 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 PMM1Q92871 262 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 ABTB1Q969K4 478 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 MAL2Q969L2 176 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 ZNF524Q96C55 264 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 WDYHV1Q96HA8 205 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 TMEM19Q96HH6 336 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 NPAS1Q99742 590 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 PRDM14Q9GZV8 571 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 TP63Q9H3D4 680 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 MTHFD2LQ9H903 347 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 SUCOQ9UBS9 1254 aaKnown RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 BBIP1A8MTZ0 92 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 E9PLN8 166 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 DNAJA2O60884 412 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 ARAFP10398 606 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 UBL4AP11441 157 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 CHMP24386 653 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 PGM1P36871 562 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 P2RX1P51575 399 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 SKP2Q13309 424 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 ADRM1Q16186 407 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 TRMT5Q32P41 509 aaKnown RBP20.25■□□□□ 0.83
PTCD3-203ENST00000409783 WLSQ5T9L3 541 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 NCCRP1Q6ZVX7 275 aaPredicted RBP20.25■□□□□ 0.83
PTCD3-203ENST00000409783 RPRMLQ8N4K4 120 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 MARVELD2Q8N4S9 558 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 CCDC120Q96HB5 630 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 TREX2Q9BQ50 279 aaPredicted RBP20.25■□□□□ 0.83
PTCD3-203ENST00000409783 VKORC1Q9BQB6 163 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 MED17Q9NVC6 651 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 FAM215AQ9Y5M1 114 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 ARHGAP21Q5T5U3 1957 aa20.25■□□□□ 0.83
PTCD3-203ENST00000409783 DOPEY1Q5JWR5 2465 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 OR2M5A3KFT3 312 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 CLDN24A6NM45 220 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 EVPLLA8MZ36 301 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 GTPBP1O00178 669 aaKnown RBP20.24■□□□□ 0.83
PTCD3-203ENST00000409783 ZNF264O43296 627 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 EIF4E2O60573 245 aaKnown RBP20.24■□□□□ 0.83
PTCD3-203ENST00000409783 LHX2P50458 406 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 CRISP3P54108 245 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 SUMO3P55854 103 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-203ENST00000409783 ADORA2A-AS1P86434 159 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 CYLC2Q14093 348 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-203ENST00000409783 CAPRIN1Q14444 709 aaKnown RBP20.24■□□□□ 0.83
PTCD3-203ENST00000409783 PLPPR5Q32ZL2 321 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 RPS26P11Q5JNZ5 115 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-203ENST00000409783 ULK2Q8IYT8 1036 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 POU5F2Q8N7G0 328 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 OR5M1Q8NGP8 315 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 ARSGQ96EG1 525 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 SFXN2Q96NB2 322 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 LAT2Q9GZY6 243 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 BCL2L10Q9HD36 194 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 CALML5Q9NZT1 146 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 CORO2BQ9UQ03 480 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 VDAC3Q9Y277 283 aa20.24■□□□□ 0.83
PTCD3-203ENST00000409783 DOPEY2Q9Y3R5 2298 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 A0A087WZY1 265 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 C7orf72A4D263 438 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 SHISA8B8ZZ34 492 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 MRASO14807 208 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 WDR1O75083 606 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 CSTAP01040 98 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 LINGO3P0C6S8 592 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 CPN1P15169 458 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 PSMA4P25789 261 aaKnown RBP20.23■□□□□ 0.83
PTCD3-203ENST00000409783 ACVR2AP27037 513 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 STARP49675 285 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 MTPNP58546 118 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 KCNJ10P78508 379 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 GCNT6Q5T4J0 391 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 PRAMEF8Q5VWM4 474 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 PRAMEF7Q5VXH5 474 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 NANOGP8Q6NSW7 305 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 ZNF585AQ6P3V2 769 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 EIF3MQ7L2H7 374 aaKnown RBP20.23■□□□□ 0.83
PTCD3-203ENST00000409783 TOR1AIP2Q8NFQ8 470 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 RP9Q8TA86 221 aaKnown RBP20.23■□□□□ 0.83
PTCD3-203ENST00000409783 POC1BQ8TC44 478 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 GPR119Q8TDV5 335 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 SSC4DQ8WTU2 575 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 PHF10Q8WUB8 498 aaKnown RBP20.23■□□□□ 0.83
PTCD3-203ENST00000409783 LRRC58Q96CX6 371 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 SLC39A3Q9BRY0 314 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 TMEM38AQ9H6F2 299 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 NANOGQ9H9S0 305 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 ZNF337Q9Y3M9 751 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 KIAA1549Q9HCM3 1950 aa20.23■□□□□ 0.83
PTCD3-203ENST00000409783 A0A0G2JPF8 293 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 FIGNL2A6NMB9 653 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 HNRNPCL2B2RXH8 293 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 HNRNPCL3B7ZW38 293 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 HNRNPCL1O60812 293 aaKnown RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 ZG16O60844 167 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 SHOX2O60902 331 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 NPPAP01160 153 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms