RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TGFBR2P37173 567 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 MC3RP41968 323 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC15A1P46059 708 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 GSSP48637 474 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 PPP1CAP62136 330 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 TSPAN31Q12999 210 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 DECR1Q16698 335 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF404Q494X3 552 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 TMEM164Q5U3C3 297 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 HEPHL1Q6MZM0 1159 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CLEC18BQ6UXF7 455 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 Q6ZPB1 254 aaPredicted RBP11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 VN1R4Q7Z5H5 301 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CLEC18CQ8NCF0 446 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OR4K5Q8NGD3 323 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OR52P1PQ8NH57 321 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 MCFD2Q8NI22 146 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OSTF1Q92882 214 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 HSPBAP1Q96EW2 488 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 DACH2Q96NX9 599 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OR2A5Q96R48 311 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CMKLR1Q99788 373 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CRNNQ9UBG3 495 aaPredicted RBP11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 AASSQ9UDR5 926 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 POMT2Q9UKY4 750 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 DAPP1Q9UN19 280 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 PEX16Q9Y5Y5 336 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC22A7Q9Y694 548 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 MN1Q10571 1320 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ISPDA4D126 451 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 A8MU76 341 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 C9orf172C9J069 976 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 M0R082 166 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 AGFG2O95081 481 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 HMGN1P05114 100 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 C8orf89P0DMQ9 161 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CPMP14384 443 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 C21orf33P30042 268 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CCKBRP32239 447 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 OPRL1P41146 370 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 GIPRP48546 466 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 PCYT1AP49585 367 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 MAN2A2P49641 1150 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 RGS6P49758 472 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CDK5Q00535 292 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF45Q02386 682 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ZFP36L1Q07352 338 aaKnown RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ITGADQ13349 1161 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 PIN1Q13526 163 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 SEC23BQ15437 767 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 MFSD12Q6NUT3 480 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC27A4Q6P1M0 643 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 RASSF6Q6ZTQ3 369 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 RANBP3LQ86VV4 465 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ATCAYQ86WG3 371 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 SLITRK4Q8IW52 837 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 OR2L13Q8N349 312 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 IL22RA1Q8N6P7 574 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CDRT4Q8N9R6 151 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 KCT2Q8NC54 265 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 RCBTB1Q8NDN9 531 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 C7orf57Q8NEG2 295 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 PROKR2Q8NFJ6 384 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 OR9A2Q8NGT5 310 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC7A13Q8TCU3 470 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ADAMTS18Q8TE60 1221 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 RFKQ969G6 155 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ABTB1Q969K4 478 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CCDC74BQ96LY2 380 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 C10orf90Q96M02 699 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CD180Q99467 661 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 STACQ99469 402 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 MGLLQ99685 303 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 MAP3K3Q99759 626 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC38A1Q9H2H9 487 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 PIGUQ9H490 435 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 OCEL1Q9H607 264 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 ISYNA1Q9NPH2 558 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 AKIP1Q9NQ31 210 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 MED17Q9NVC6 651 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 KCMF1Q9P0J7 381 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 PILRAQ9UKJ1 303 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 C19orf53Q9UNZ5 99 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CFL2Q9Y281 166 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 WDR45Q9Y484 360 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 PCDHGA3Q9Y5H0 932 aa11.96□□□□□ -0.49
SMARCB1-203ENST00000407082 CACNA1DQ01668 2161 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 IGHV5-51A0A0C4DH38 117 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 PRAMEF27A3QJZ7 478 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TLCD2A6NGC4 264 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 M0R3H8 397 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 MYL12BO14950 172 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TOX3O15405 576 aaPredicted RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 MAN1A2O60476 641 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 COQ9O75208 318 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 ENTPD6O75354 484 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 RAB36O95755 333 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 DBIP07108 87 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms