RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 IRGMA1A4Y4 181 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 RAB36O95755 333 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CH25HO95992 272 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 PDGFBP01127 241 aaPredicted RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CKMT1AP12532 417 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 MAKP20794 623 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ACAA2P42765 397 aaKnown RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 SERPINB10P48595 397 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 YOD1Q5VVQ6 348 aaPredicted RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 RNLSQ5VYX0 342 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ARHGAP22Q7Z5H3 698 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ADCK1Q86TW2 530 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 C7orf57Q8NEG2 295 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ANKK1Q8NFD2 765 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 OR52I1Q8NGK6 324 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 DYNC2LI1Q8TCX1 351 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 SLC35B4Q969S0 331 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ARSGQ96EG1 525 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 DTNBP1Q96EV8 351 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 MND1Q9BWT6 205 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 SIDT1Q9NXL6 827 aaKnown RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 FLRT3Q9NZU0 649 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CLEC2DQ9UHP7 191 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 PILRBQ9UKJ0 227 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 DIMT1Q9UNQ2 313 aaKnown RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CLCA3PQ9Y6N3 262 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ASXL3Q9C0F0 2248 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CABIN1Q9Y6J0 2220 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 A0A0B4J2E0 115 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 A0A1B0GTQ1 180 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 A0A1B0GX12 115 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CPED1A4D0V7 1026 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 KPNA4O00629 521 aaPredicted RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 SURF4O15260 269 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CHP2O43745 196 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 NADKO95544 446 aaPredicted RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 TSTQ16762 297 aaKnown RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ARHGAP40Q5TG30 622 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 C1orf189Q5VU69 101 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 CROCCP3Q8IVE0 287 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 BRIX1Q8TDN6 353 aaKnown RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF501Q96CX3 271 aaPredicted RBP22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 SLC46A1Q96NT5 459 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 MED17Q9NVC6 651 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 RPS6KB2Q9UBS0 482 aa22.76■■□□□ 1.23
DNMT3A-206ENST00000406659 IGKV3D-11A0A0A0MRZ8 115 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 A0A1B0GX78 115 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 KDM4EB2RXH2 506 aaPredicted RBP22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 INHBBP09529 407 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 PNLIPP16233 465 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 RORAP35398 523 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 SLC37A1P57057 533 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 TMEM44Q2T9K0 475 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 TMEM71Q6P5X7 295 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 HSDL2Q6YN16 418 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 KANSL1Q7Z3B3 1105 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 OR52L1Q8NGH7 329 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 FANK1Q8TC84 345 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 BPIFA2Q96DR5 249 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 RNFT2Q96EX2 444 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 OR8D2Q9GZM6 311 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 RACGAP1Q9H0H5 632 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 HHATLQ9HCP6 504 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 ATP13A2Q9NQ11 1180 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 C20orf141Q9NUB4 165 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 IL20RAQ9UHF4 553 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 CFL2Q9Y281 166 aa22.75■■□□□ 1.23
DNMT3A-206ENST00000406659 SERINC4A6NH21 518 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 CSTAP01040 98 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 PPICP45877 212 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 ZXDAP98168 799 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF829Q3KNS6 432 aaPredicted RBP22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 TMPRSS11FQ6ZWK6 438 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 NANOGP1Q8N7R0 232 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF321PQ8N8H1 164 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 OR4C3Q8NH37 302 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 MAFAQ8NHW3 353 aaPredicted RBP22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 PIGKQ92643 395 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 OR52D1Q9H346 318 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 UBQLN3Q9H347 655 aa22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 PRMT8Q9NR22 394 aaPredicted RBP22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 MRPS18AQ9NVS2 196 aaKnown RBP22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 LSM2Q9Y333 95 aaKnown RBP22.74■■□□□ 1.23
DNMT3A-206ENST00000406659 CCRL2O00421 344 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 MYL12BO14950 172 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 POLR1CO15160 346 aaPredicted RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 TOX3O15405 576 aaPredicted RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 LAMTOR5O43504 91 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 RCBTB2O95199 551 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 UGT2B10P36537 528 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 BMXP51813 675 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 RAB40BQ12829 278 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 SPHARQ15513 63 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 BMP8AQ7Z5Y6 402 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 CADM2Q8N3J6 435 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 LSMEM1Q8N8F7 131 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 PROKR2Q8NFJ6 384 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 OR4C6Q8NH72 309 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 RFKQ969G6 155 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms