RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GRPRP30550 384 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ARFIP1P53367 373 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 OR12D2P58182 307 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SGCAQ16586 387 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ESX1Q8N693 406 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 OR7G1Q8NGA0 311 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 C16orf52Q8NHV5 167 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CNOT9Q92600 299 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 PPP1R14AQ96A00 147 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 NXPE2Q96DL1 559 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ARSGQ96EG1 525 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SLC35A4Q96G79 324 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CRELD1Q96HD1 420 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 PHF12Q96QT6 1004 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SDF2Q99470 211 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 MND1Q9BWT6 205 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 TCF7L1Q9HCS4 588 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 PCOLCE2Q9UKZ9 415 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SIP14410 1827 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 C2orf72A6NCS6 295 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 PABPC4LP0CB38 370 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 CCNOP22674 350 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 OMPP47874 163 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SSR4P51571 173 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 KRR1Q13601 381 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 MFSD13AQ14CX5 517 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ALG10Q5BKT4 473 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 WBP2NLQ6ICG8 309 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 C1orf94Q6P1W5 598 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 LEG1Q6P5S2 330 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SHFQ7M4L6 423 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 MARCH9Q86YJ5 346 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SIRT6Q8N6T7 355 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 DEFB124Q8NES8 71 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 OR1L3Q8NH93 324 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ENKURQ8TC29 256 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 NSMAFQ92636 917 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 DDIT4LQ96D03 193 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 WDR77Q9BQA1 342 aaPredicted RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 ORAI3Q9BRQ5 295 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 TMED9Q9BVK6 235 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SACM1LQ9NTJ5 587 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 C2orf42Q9NWW7 574 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 CAB39Q9Y376 341 aaPredicted RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 ASB4Q9Y574 426 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 CACNA1GO43497 2377 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 NINQ8N4C6 2090 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SCN3AQ9NY46 2000 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 TRAV27A0A087WT01 109 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SLC22A31A6NKX4 558 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SULT2B1O00204 365 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 GNAO1P09471 354 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 MAP2K4P45985 399 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 RAE1P78406 368 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 OR7A5Q15622 319 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ZBED5Q49AG3 693 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 PYDC2Q56P42 97 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ATG14Q6ZNE5 492 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 RBM45Q8IUH3 476 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 CPOQ8IVL8 374 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SLITRK4Q8IW52 837 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 NAA11Q9BSU3 229 aaPredicted RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 FAM86C1Q9NVL1 165 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 AASSQ9UDR5 926 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 IER3IP1Q9Y5U9 82 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 A0A1B0GWA3 101 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ANXA2P2A6NMY6 339 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 FAM171A2A8MVW0 826 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 H3BSA7 217 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SYT5O00445 386 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 FARS2O95363 451 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 RAB36O95755 333 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ANXA2P07355 339 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 AZGP1P25311 298 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 DCKP27707 260 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 RCVRNP35243 200 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 STT3AP46977 705 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 MRPL28Q13084 256 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 NDUFAF6Q330K2 333 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 FCRL6Q6DN72 434 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SPRED1Q7Z699 444 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SNRNP27Q8WVK2 155 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 FER1L6-AS2Q96M78 137 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 TWSG1Q9GZX9 223 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 OR52D1Q9H346 318 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 SLC6A13Q9NSD5 602 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 GPR83Q9NYM4 423 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 RFPL3O75679 317 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 MT-ND5P03915 603 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 WNT1P04628 370 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 PRKAR1BP31321 381 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 PYCR1P32322 319 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 DLSTP36957 453 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 MTNR1AP48039 350 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 CTBP2P56545 445 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 UBE2IP63279 158 aaKnown RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 DMWDQ09019 674 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 PDE7AQ13946 482 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms