RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 EHFQ9NZC4 300 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 Q9UF83 564 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 ZNF107Q9UII5 783 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 MEMO1Q9Y316 297 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 OARD1Q9Y530 152 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 ALG6Q9Y672 507 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 POGZQ7Z3K3 1410 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 IGKV3D-20A0A0C4DH25 116 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 VSTM2BA6NLU5 285 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 KIF2AO00139 706 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 MPHOSPH10O00566 681 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 PGK1P00558 417 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CCDC166P0CW27 439 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 PDHBP11177 359 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 TBXA2RP21731 343 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 GLRA2P23416 452 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 NF2P35240 595 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 RDXP35241 583 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 XCR1P46094 333 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 FNTAP49354 379 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 STARP49675 285 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 RND3P61587 244 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 RPS8P62241 208 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 OTUD4Q01804 1114 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 OC90Q02509 493 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 IL24Q13007 206 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CHIT1Q13231 466 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 GSG1Q2KHT4 349 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 TP53I3Q53FA7 332 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 MARC1Q5VT66 337 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 FBXL22Q6P050 247 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 PMF1Q6P1K2 205 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 APTXQ7Z2E3 356 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CDC20BQ86Y33 519 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 ANKFN1Q8N957 763 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 TFB1MQ8WVM0 346 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CELF6Q96J87 481 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 MS4A14Q96JA4 679 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 SENP8Q96LD8 212 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR5B2Q96R09 309 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC30A2Q9BRI3 323 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 FEM1AQ9BSK4 669 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 DUSP16Q9BY84 665 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CRNKL1Q9BZJ0 848 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 POLR1EQ9GZS1 481 aaKnown RBP2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 GLIPR2Q9H4G4 154 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CAB39LQ9H9S4 337 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC17A5Q9NRA2 495 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC7A10Q9NS82 523 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 RNF14Q9UBS8 474 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 CLEC4AQ9UMR7 237 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 PDE10AQ9Y233 779 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 WDR45Q9Y484 360 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 MAD1L1Q9Y6D9 718 aa2.93□□□□□ -1.94
HMGB1P17-201ENST00000403495 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 PHOX2AO14813 284 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 MAGEB3O15480 346 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 RIPK2O43353 540 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 LRATO95237 230 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 ADCY5O95622 1261 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 NCK1P16333 377 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 CALB2P22676 271 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 LAP3P28838 519 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 DHPSP49366 369 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 PPT1P50897 306 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 HSPA2P54652 639 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 SPIBQ01892 262 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 NDUFA9Q16795 377 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC22A10Q63ZE4 541 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 FAM199XQ6PEV8 388 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 SERPINA9Q86WD7 417 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 ZNF677Q86XU0 584 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC39A11Q8N1S5 342 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 SH3YL1Q96HL8 342 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 MAGT1Q9H0U3 335 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 IL36GQ9NZH8 169 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 RIMS3Q9UJD0 308 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 ZNF221Q9UK13 617 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 ANGPTL2Q9UKU9 493 aa2.92□□□□□ -1.94
HMGB1P17-201ENST00000403495 LOC100131303A0A0U1RQF7 123 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 MBLAC1A4D2B0 266 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 LRP5LA4QPB2 252 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 CYSRT1A8MQ03 144 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 FAM220BPB1ANY3 271 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 ARPC3O15145 178 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 BCL2L11O43521 198 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 NUDT21O43809 227 aaKnown RBP2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 SPAG6O75602 509 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 PGCP20142 388 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 SERPINA2P20848 420 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 VDAC1P21796 283 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 ADORA2BP29275 332 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 OTX2P32243 289 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 PTGER3P43115 390 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR3A4PP47883 348 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 RPL34P49207 117 aaKnown RBP2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 RIPK4P57078 832 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 CD47Q08722 323 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 RAB40BQ12829 278 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms