RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PSD2Q9BQI7 771 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 VPS11Q9H270 941 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 Q9N2J8 555 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 KCNS2Q9ULS6 477 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SNX8Q9Y5X2 465 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GNG14A0A1W2PPG7 69 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 A8MT66 165 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GOLGA6L6A8MZA4 724 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 RAD51CO43502 376 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NDUFB5O43674 189 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PRKD3O94806 890 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NKX2-2O95096 273 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FESP07332 822 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ACP2P11117 423 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 DDCP20711 480 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TIA1P31483 386 aaKnown RBP eCLIP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MPIP34949 423 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CLK3P49761 638 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GZMKP49863 264 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZNF83P51522 516 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GGTLC2Q14390 218 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 RNPS1Q15287 305 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CR1LQ2VPA4 569 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TMEM176BQ3YBM2 270 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GLE1Q53GS7 698 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 UNC50Q53HI1 259 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TIMM23BQ5SRD1 257 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FAM71E1Q6IPT2 247 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GALNT18Q6P9A2 607 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CBLN3Q6UW01 205 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZNF551Q7Z340 670 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 DEPDC4Q8N2C3 294 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 OR2W6PQ8NHA6 318 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FBXO30Q8TB52 745 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FBXO25Q8TCJ0 367 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ACTRT2Q8TDY3 377 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GIMAP5Q96F15 307 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 C1QTNF3Q9BXJ4 246 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 BCO1Q9HAY6 547 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 EQTNQ9NQ60 294 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FAIMQ9NVQ4 179 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SENP1Q9P0U3 644 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SNX6Q9UNH7 406 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SLC25A15Q9Y619 301 aa10.46□□□□□ -0.73
SPTLC1P3-201ENST00000403408 A0A1W2PNR3 127 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 OR5H1A6NKK0 313 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF195O14628 629 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 VENTXO95231 258 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 OTCP00480 354 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NGFRP08138 427 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CD40P25942 277 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TYK2P29597 1187 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NR4A2P43354 598 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 FABP6P51161 128 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 EFNA4P52798 201 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 BTKQ06187 659 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C2orf80Q0P641 193 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NAB1Q13506 487 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLC29A2Q14542 456 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 HEPACAMQ14CZ8 416 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NDUFAF6Q330K2 333 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 EXOSC6Q5RKV6 272 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GTF2IRD2BQ6EKJ0 949 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KLC3Q6P597 504 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CCDC91Q7Z6B0 441 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GTF2IRD2Q86UP8 949 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SAMD14Q8IZD0 417 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 FBXO27Q8NI29 283 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CPNE4Q96A23 557 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C3orf49Q96BT1 292 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 FOXN4Q96NZ1 517 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KCNA7Q96RP8 456 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C1QTNF6Q9BXI9 259 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ANKZF1Q9H8Y5 726 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GP6Q9HCN6 339 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GIMAP4Q9NUV9 329 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 DDX18Q9NVP1 670 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TAS2R7Q9NYW3 318 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 STOML1Q9UBI4 398 aa10.45□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SMAD9O15198 467 aaKnown RBP10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RGS14O43566 566 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KCNK2O95069 426 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 H6PDO95479 791 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 IGHV3-9P01782 118 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ANXA4P09525 319 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 HSD3B1P14060 373 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 HSD3B2P26439 372 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 IL2RGP31785 369 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 STX2P32856 288 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SERPINB8P50452 374 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PLTPP55058 493 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLC25A3Q00325 362 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF117Q03924 483 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CLCQ05315 142 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 DUSP5Q16690 384 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PDSS1Q5T2R2 415 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CCNJQ5T5M9 372 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms