RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 PPP1R14DQ9NXH3 145 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 HAO2Q9NYQ3 351 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 POM121CA8CG34 1229 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 TPPPO94811 219 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 UBL4AP11441 157 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 FAM180BQ6P0A1 224 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 BBS1Q8NFJ9 593 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 DOK4Q8TEW6 326 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 TXNDC15Q96J42 360 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 DCAF13Q9NV06 445 aaKnown RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 KLF8O95600 359 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 APBB3O95704 486 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 TP53P04637 393 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 KIAA0895LQ68EN5 471 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF808Q8N4W9 903 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 NANOS1Q8WY41 292 aaKnown RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 TFAP2CQ92754 450 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 MIB2Q96AX9 1013 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 CAPNS2Q96L46 248 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 HRH4Q9H3N8 390 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF160Q9HCG1 818 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 OR5K4A6NMS3 321 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 M0R3H8 397 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 RTCAO00442 366 aaKnown RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 NPC1O15118 1278 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 RDH16O75452 317 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 ACPPP15309 386 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 SCAPQ12770 1279 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 TP53I3Q53FA7 332 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 METAP1DQ6UB28 335 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 CYB561A3Q8NBI2 242 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 INTS14Q96SY0 518 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 RPS17P08708 135 aaKnown RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 BPIP17213 487 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 ETV5P41161 510 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 DLX5P56178 289 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 KLHDC8AQ8IYD2 350 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 GTF2H4Q92759 462 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 SLC2A13Q96QE2 648 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 THSD1Q9NS62 852 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 CD300LBA8K4G0 201 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 FAM171A2A8MVW0 826 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 E9PI62 339 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 SCAF4O95104 1147 aaKnown RBP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 GJA5P36382 358 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 FAM109AQ8N4B1 249 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSMD1-202ENST00000400186 IL17FQ96PD4 163 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 MYADMQ96S97 322 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 SMIM3Q9BZL3 60 aa9.07□□□□□ -0.96
CSMD1-202ENST00000400186 TCRBV21S2A2A0A5A6 115 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 TM4SF1P30408 202 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 TMPRSS7Q7RTY8 843 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 OR4N5Q8IXE1 308 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 FUBP1Q96AE4 644 aaKnown RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 OR10A5Q9H207 317 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 OR10A2Q9H208 303 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 HLA-DMAP28067 261 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 DAP3P51398 398 aaKnown RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 AAK1Q2M2I8 961 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 PAPD4Q6PIY7 484 aaKnown RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 DIO2Q92813 273 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 C5AR2Q9P296 337 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 COPS3Q9UNS2 423 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 FAM227AF5H4B4 570 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 F5H5K5 113 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 SRPX2O60687 465 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 UGDHO60701 494 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 NDUFB2O95178 105 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 P04436 131 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 GABRR1P24046 479 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 FAM189BP81408 668 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 MS4A2Q01362 244 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 HMGN3Q15651 99 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 C18orf21Q32NC0 220 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 OR4M1Q8NGD0 313 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 TMIGD2Q96BF3 282 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 PEX11GQ96HA9 241 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF416Q9BWM5 594 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 OR51E2Q9H255 320 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 SHANK1Q9Y566 2161 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 A6NIZ1 184 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 G3V2L1 256 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 SNRNP70P08621 437 aaKnown RBP9.06□□□□□ -0.96
CSMD1-202ENST00000400186 BMP4P12644 408 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 CRHBPP24387 322 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 ERVPABLB-1P60509 514 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 RAP1BP61224 184 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 RAP1AP62834 184 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 GAB1Q13480 694 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 HIST2H3PS2Q5TEC6 136 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 SBSNQ6UWP8 590 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF610Q8N9Z0 462 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 IGSF8Q969P0 613 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 OR2M2Q96R28 347 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 CDH20Q9HBT6 801 aa9.06□□□□□ -0.96
CSMD1-202ENST00000400186 KCMF1Q9P0J7 381 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms