RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 KRBA1A5PL33 1030 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SPHARQ15513 63 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 TEX19Q8NA77 164 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 OR8J1Q8NGP2 316 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 F13BP05160 661 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 UCHL1P09936 223 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 NIPAL3Q6P499 406 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 LILRB2Q8N423 598 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 TVP23AA6NH52 213 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SERPINA2P20848 420 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 EIF5AL1Q6IS14 154 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 CPOQ8IVL8 374 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 DUSP19Q8WTR2 217 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 EIF5A2Q9GZV4 153 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 ESX1Q8N693 406 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 BPIFA2Q96DR5 249 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 FAM117AQ9C073 453 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 ARRDC1-AS1Q9H2J1 176 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PLEKHM1Q9Y4G2 1056 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 LPLP06858 475 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 UGT2B10P36537 528 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 ERVK-16P61578 105 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PHC1P78364 1004 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PPA1Q15181 289 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 HSF5Q4G112 596 aaPredicted RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 MTFR2Q6P444 385 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 OPN5Q6U736 354 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 GPR150Q8NGU9 434 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 HDAC2Q92769 488 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 WDR83Q9BRX9 315 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 CSNK1G1Q9HCP0 422 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 KLHL13Q9P2N7 655 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 AIFM1O95831 613 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 TPOP07202 933 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 FAM43BQ6ZT52 329 aaPredicted RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 RELL1Q8IUW5 271 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 ZADH2Q8N4Q0 377 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 MINDY1Q8N5J2 469 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SFXN5Q8TD22 340 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 ZNF355PQ9NSJ1 428 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PAK1IP1Q9NWT1 392 aaPredicted RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 STUB1Q9UNE7 303 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PCDH17O14917 1159 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 UGDHO60701 494 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SLITRK5O94991 958 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SERPINA5P05154 406 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 HIST1H1TP22492 207 aaPredicted RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 CHRNB4P30926 498 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PAGE3Q5JUK9 113 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 HSD17B8Q92506 261 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SLC45A3Q96JT2 553 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 FER1L6-AS2Q96M78 137 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 MYADMQ96S97 322 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 SYT4Q9H2B2 425 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 C6orf106Q9H6K1 298 aaPredicted RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 INIPQ9NRY2 104 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 ERVK13-1Q9NX77 482 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 STT3AP46977 705 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 PTH2RP49190 550 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 TCEAL1Q15170 157 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 TAZQ16635 292 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 HAGHLQ6PII5 290 aaPredicted RBP10.65□□□□□ -0.71
TTC28-201ENST00000397906 JRKO75564 520 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 HTR3AP46098 478 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 SFRP4Q6FHJ7 346 aaPredicted RBP10.65□□□□□ -0.71
TTC28-201ENST00000397906 ISOC1Q96CN7 298 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 TEX10Q9NXF1 929 aaPredicted RBP10.65□□□□□ -0.71
TTC28-201ENST00000397906 ST14Q9Y5Y6 855 aa10.65□□□□□ -0.71
TTC28-201ENST00000397906 ZNF749O43361 778 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 DOK2O60496 412 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 CAMK2DQ13557 499 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 PLEKHN1Q494U1 663 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 PDXPQ96GD0 296 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 MGLLQ99685 303 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ULBP2Q9BZM5 246 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 IGHV3-20A0A0C4DH32 117 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 LOC102725191A0A1B0GVB3 256 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 G3V2L1 256 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 EIF3FO00303 357 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 SORBS2O94875 1100 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 GLSO94925 669 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 ZNF44P15621 663 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 POLR2HP52434 150 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 ZC3H10Q96K80 434 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 YTHDF1Q9BYJ9 559 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 MAGIXQ9H6Y5 334 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 UBQLN4Q9NRR5 601 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 MPIG6BO95866 241 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 GPR50Q13585 617 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ENTPD8Q5MY95 495 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 MOB3CQ70IA8 216 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 TSPEARQ8WU66 669 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ITFG2Q969R8 447 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 QRSL1Q9H0R6 528 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 FGF21Q9NSA1 209 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 GNAO1P09471 354 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 AOAHP28039 575 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 CXCR4P61073 352 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms