RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 EIPR1Q53HC9 387 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 ALG10BQ5I7T1 473 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 AGAP7PQ5VUJ5 663 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 CNIH2Q6PI25 160 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 PRR23CQ6ZRP0 262 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 USP53Q70EK8 1073 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 ZAR1Q86SH2 424 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 GJD3Q8N144 294 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 Q8N402 240 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 LINC00471Q8N535 108 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 FAM26EQ8N5C1 309 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 MORN4Q8NDC4 146 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 SNX33Q8WV41 574 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 C17orf50Q8WW18 174 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 EFHD2Q96C19 240 aaPredicted RBP9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 BPIFA2Q96DR5 249 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 AHCYL2Q96HN2 611 aaKnown RBP9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 NECTIN4Q96NY8 510 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 OR2A14Q96R47 310 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 PITHD1Q9GZP4 211 aaPredicted RBP9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 ENKD1Q9H0I2 346 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 FN3KQ9H479 309 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 TAS2R7Q9NYW3 318 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 NUFIP1Q9UHK0 495 aaKnown RBP9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 GRIP1Q9Y3R0 1128 aa9.71□□□□□ -0.85
CPSF1P1-201ENST00000397477 SNRNP200O75643 2136 aaKnown RBP9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 PLXNB3Q9ULL4 1909 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ZNF670-ZNF695F2Z2N8 137 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 CHST10O43529 356 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 HCRTR1O43613 425 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 LALBAP00709 142 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 HLA-DPB1P04440 258 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 CT62P0C5K7 136 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ERGP11308 486 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 KIR2DS3Q14952 304 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 UBXN2BQ14CS0 331 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ZIC1Q15915 447 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 TBRG1Q3YBR2 411 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 NXNL2Q5VZ03 156 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ABI3BPQ7Z7G0 1075 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 VWA5B2Q8N398 1253 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ACBD7Q8N6N7 88 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 MINDY2Q8NBR6 621 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 SFXN5Q8TD22 340 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 GAL3ST1Q99999 423 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ALG8Q9BVK2 526 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 GSDMCQ9BYG8 508 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 MCOLN1Q9GZU1 580 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 SIDT1Q9NXL6 827 aaKnown RBP9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 NLKQ9UBE8 527 aa9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 DIMT1Q9UNQ2 313 aaKnown RBP9.71□□□□□ -0.86
CPSF1P1-201ENST00000397477 ISPDA4D126 451 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 CENPXA8MT69 81 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 DVL2O14641 736 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 GPR75O95800 540 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 LSSP48449 732 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 PRKCDQ05655 676 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 DMPKQ09013 629 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 RAB40BQ12829 278 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 TP53I3Q53FA7 332 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 SHISA6Q6ZSJ9 500 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 SAMD14Q8IZD0 417 aaPredicted RBP9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 TMEM99Q8N816 258 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 SAMD12Q8N8I0 201 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 RIT1Q92963 219 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 ELSPBP1Q96BH3 223 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 SPACA7Q96KW9 195 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 INIPQ9NRY2 104 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 EXOSC1Q9Y3B2 195 aaKnown RBP9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 HYKKA2RU49 373 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 MAOAP21397 527 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 ACVR2AP27037 513 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 BTG2P78543 158 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 SELENBP1Q13228 472 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 CEACAM19Q7Z692 300 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 OR5M3Q8NGP4 307 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 OR2A5Q96R48 311 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 BTBD2Q9BX70 525 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 SLC25A19Q9HC21 320 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 NEK6Q9HC98 313 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 BCL2L10Q9HD36 194 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 FAM60AQ9NP50 221 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 ERVK-19Q9WJR5 959 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 MAP1BP46821 2468 aaKnown RBP9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 NDUFB5O43674 189 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 HCN1O60741 890 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 MAKP20794 623 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 PSMB10P40306 273 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 STAT5AP42229 794 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 TNFRSF4P43489 277 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 CTBP2P56545 445 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 CRMP1Q14194 572 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 IRF3Q14653 427 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 OCLNQ16625 522 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 MRM1Q6IN84 353 aaKnown RBP9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 RASSF6Q6ZTQ3 369 aa9.7□□□□□ -0.86
CPSF1P1-201ENST00000397477 ZNF619Q8N2I2 560 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms