RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TTC9Q92623 222 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 GABARAPL1Q9H0R8 117 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 TESQ9UGI8 421 aaKnown RBP25.2■■□□□ 1.62
CPNE1-203ENST00000397442 HEATR5AQ86XA9 2040 aa25.19■■□□□ 1.62
CPNE1-203ENST00000397442 TRBV4-1A0A0J9YWV2 114 aa25.19■■□□□ 1.62
CPNE1-203ENST00000397442 OR6B1O95007 311 aa25.19■■□□□ 1.62
CPNE1-203ENST00000397442 UBL4AP11441 157 aa25.19■■□□□ 1.62
CPNE1-203ENST00000397442 WT1P19544 449 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-203ENST00000397442 ST13P50502 369 aaKnown RBP25.19■■□□□ 1.62
CPNE1-203ENST00000397442 PPP2R2BQ00005 443 aa25.19■■□□□ 1.62
CPNE1-203ENST00000397442 BRIX1Q8TDN6 353 aaKnown RBP25.19■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF184Q99676 751 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-203ENST00000397442 FNDC11Q9BVV2 318 aa25.19■■□□□ 1.62
CPNE1-203ENST00000397442 A0A1W2PRQ8 180 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 C7orf72A4D263 438 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 ALPLP05186 524 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 ELAVL4P26378 380 aaKnown RBP25.18■■□□□ 1.62
CPNE1-203ENST00000397442 TAS2R41P59536 307 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 DAG1Q14118 895 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 DGCR6Q14129 220 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 CBLN3Q6UW01 205 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 OR10G3Q8NGC4 313 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 NR4A3Q92570 626 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 TMCO6Q96DC7 493 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 OSBPL10Q9BXB5 764 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 TBL1XR1Q9BZK7 514 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 SMURF2Q9HAU4 748 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 C8orf4Q9NR00 106 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 WDR70Q9NW82 654 aa25.18■■□□□ 1.62
CPNE1-203ENST00000397442 PDP1Q9P0J1 537 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-203ENST00000397442 C17orf51A8MQB3 221 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 DLGAP1O14490 977 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ARHGDIAP52565 204 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 GK3PQ14409 553 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 B3GNTL1Q67FW5 361 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 PLEKHM3Q6ZWE6 761 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF550Q7Z398 422 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 SIRT6Q8N6T7 355 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 MAGEE2Q8TD90 523 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 SDCCAG3Q96C92 435 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 THOC3Q96J01 351 aaKnown RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF597Q96LX8 424 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ALPK1Q96QP1 1244 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 VCXQ9H320 206 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 EXOSC3Q9NQT5 275 aaKnown RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 CARD8Q9Y2G2 431 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 H0YJX3 145 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 H3BNH8 94 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF264O43296 627 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 NDUFB5O43674 189 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 OR5F1O95221 314 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ANGPTL1O95841 491 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 SSR4P51571 173 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ALDH3A2P51648 485 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 EPS8Q12929 822 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 FOXD4Q12950 439 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 SEC23BQ15437 767 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 OR1Q1Q15612 314 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 MICAQ29983 383 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 OPN5Q6U736 354 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 SLC7A13Q8TCU3 470 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 POLR2J2Q9GZM3 115 aaKnown RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 POLR2J3Q9H1A7 115 aaKnown RBP25.17■■□□□ 1.62
CPNE1-203ENST00000397442 USE1Q9NZ43 259 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 LRRC42Q9Y546 428 aa25.17■■□□□ 1.62
CPNE1-203ENST00000397442 ASPMQ8IZT6 3477 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 SCO2O43819 266 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 CYP7B1O75881 506 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 SMIM11AP58511 58 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF117Q03924 483 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 FGD3Q5JSP0 725 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 JMJD6Q6NYC1 403 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-203ENST00000397442 GDF7Q7Z4P5 450 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF440Q8IYI8 595 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 FER1L6-AS2Q96M78 137 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 KLHDC3Q9BQ90 382 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF559Q9BR84 538 aa25.16■■□□□ 1.62
CPNE1-203ENST00000397442 PIEZO1Q92508 2521 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 GTPBP1O00178 669 aaKnown RBP25.15■■□□□ 1.62
CPNE1-203ENST00000397442 NKX2-8O15522 239 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 LYPD3O95274 346 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 GAS1P54826 345 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 AIMP2Q13155 320 aaKnown RBP25.15■■□□□ 1.62
CPNE1-203ENST00000397442 LSMEM1Q8N8F7 131 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 GIPC3Q8TF64 312 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 ASB15Q8WXK1 588 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 DNAJC9Q8WXX5 260 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 SLC41A3Q96GZ6 507 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 RBM4BQ9BQ04 359 aaKnown RBP25.15■■□□□ 1.62
CPNE1-203ENST00000397442 RBM4Q9BWF3 364 aaKnown RBP25.15■■□□□ 1.62
CPNE1-203ENST00000397442 LAT2Q9GZY6 243 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 ATP13A2Q9NQ11 1180 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 RYDENQ9NUL5 291 aaKnown RBP25.15■■□□□ 1.62
CPNE1-203ENST00000397442 CHCHD2Q9Y6H1 151 aaPredicted RBP25.15■■□□□ 1.62
CPNE1-203ENST00000397442 MED13Q9UHV7 2174 aa25.15■■□□□ 1.62
CPNE1-203ENST00000397442 CELSR3Q9NYQ7 3312 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 HPRP00739 348 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 RYKP34925 604 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 PTGDSP41222 190 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 ST3GAL3Q11203 375 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms