RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RUNDC3AQ59EK9 446 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 GCNT6Q5T4J0 391 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 AP1ARQ63HQ0 302 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 REP15Q6BDI9 236 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 AAGABQ6PD74 315 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 MTDHQ86UE4 582 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 OR5M1Q8NGP8 315 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 MAL2Q969L2 176 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 ANKRD27Q96NW4 1050 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 TRIM8Q9BZR9 551 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 A4GALTQ9NPC4 353 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 CALML5Q9NZT1 146 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 SPTAN1Q13813 2472 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 AGAP5A6NIR3 686 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 FAM47E-STBD1D6RA91 191 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 E9PLN8 166 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 MRASO14807 208 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 ZNF264O43296 627 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 ZG16O60844 167 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 CSTAP01040 98 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 ACVR2AP27037 513 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 P2RX1P51575 399 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 SUMO3P55854 103 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 MTPNP58546 118 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 CYLC2Q14093 348 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 GNA13Q14344 377 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 CAPRIN1Q14444 709 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 FGFBP1Q14512 234 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 TRMT5Q32P41 509 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 COQ5Q5HYK3 327 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 RPS26P11Q5JNZ5 115 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 MTFR2Q6P444 385 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 EIF3MQ7L2H7 374 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 PM20D2Q8IYS1 436 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 RPRMLQ8N4K4 120 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 VKORC1Q9BQB6 163 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 PRDM14Q9GZV8 571 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 MED17Q9NVC6 651 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 ICAM5Q9UMF0 924 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 CAMK2AQ9UQM7 478 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 COL12A1Q99715 3063 aa19.19■□□□□ 0.66
TSPAN4-206ENST00000397408 A0A087WZY1 265 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 SHISA8B8ZZ34 492 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 EIF4E2O60573 245 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 WDR1O75083 606 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 CYP7B1O75881 506 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 NUDT14O95848 222 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 UBTFL6P0CB48 400 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 GPX2P18283 190 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 CHMP24386 653 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 STARP49675 285 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 CCR4P51679 360 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 SKP2Q13309 424 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 SELPLGQ14242 412 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 PLPPR5Q32ZL2 321 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 ENPP6Q6UWR7 440 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 ULK2Q8IYT8 1036 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 POU5F2Q8N7G0 328 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 WDYHV1Q96HA8 205 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 DMRTA2Q96SC8 542 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 TREX2Q9BQ50 279 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 PIGQQ9BRB3 760 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 MTHFD2LQ9H903 347 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 SLC35A3Q9Y2D2 325 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 DSPPQ9NZW4 1301 aa19.18■□□□□ 0.66
TSPAN4-206ENST00000397408 SPTBN1Q01082 2364 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 OR2M5A3KFT3 312 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 CLDN24A6NM45 220 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ARAFP10398 606 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 GABRA1P14867 456 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 RPS4Y1P22090 263 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ADH7P40394 386 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 LHX2P50458 406 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 GLYR1Q49A26 553 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 C1orf185Q5T7R7 199 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 PEX5LQ8IYB4 626 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 TOR1AIP2Q8NFQ8 470 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 WDR60Q8WVS4 1066 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 PMM1Q92871 262 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 SLC39A3Q9BRY0 314 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 THUMPD3Q9BV44 507 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 CCDC106Q9BWC9 280 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 LAT2Q9GZY6 243 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 FAM215AQ9Y5M1 114 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 WIPF3A6NGB9 483 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 C5orf58C9J3I9 102 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 FXYD1O00168 92 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 BCAS1O75363 584 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 DBIP07108 87 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ZNF17P17021 662 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 POU3F2P20265 443 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 PGM1P36871 562 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 KCNJ10P78508 379 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ADORA2A-AS1P86434 159 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 TMEM44Q2T9K0 475 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 RTL6Q6ICC9 239 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 B3GNT6Q6ZMB0 384 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 MARVELD2Q8N4S9 558 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 FAM71CQ8NEG0 241 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms