RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 C16orf62Q7Z3J2 963 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 GTF2IRD2Q86UP8 949 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 UBQLNLQ8IYU4 475 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 CLECL1Q8IZS7 167 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 OR5AK3PQ8NH89 298 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 INTS12Q96CB8 462 aaKnown RBP12.57□□□□□ -0.4
SEC13-204ENST00000397099 ATP6V1G3Q96LB4 118 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 FANCFQ9NPI8 374 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 GLRX2Q9NS18 164 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 MED17Q9NVC6 651 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
SEC13-204ENST00000397099 VDAC3Q9Y277 283 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 GPR45Q9Y5Y3 372 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 TUBAL3A6NHL2 446 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ADAMDEC1O15204 470 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ZNF264O43296 627 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ALDOCP09972 364 aaKnown RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 TCEA1P23193 301 aaKnown RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 EPHA3P29320 983 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 CHI3L1P36222 383 aaPredicted RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 CPA2P48052 419 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 HPCAP84074 193 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ZNF141Q15928 474 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 PDCD4Q53EL6 469 aaKnown RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 SAXO2Q658L1 398 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 NXNQ6DKJ4 435 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 HEPHL1Q6MZM0 1159 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ZAR1Q86SH2 424 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 GALNT10Q86SR1 603 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ZNF75CPQ92670 426 aaPredicted RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 C7orf26Q96N11 449 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 OR52E6Q96RD3 313 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 PANX1Q96RD7 426 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 PINK1Q9BXM7 581 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ZNF350Q9GZX5 532 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 FBXO34Q9NWN3 711 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 ZIM2Q9NZV7 527 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 MARCOQ9UEW3 520 aaPredicted RBP12.56□□□□□ -0.4
SEC13-204ENST00000397099 LIPT1Q9Y234 373 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 KIAA1549Q9HCM3 1950 aa12.56□□□□□ -0.4
SEC13-204ENST00000397099 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 CCDC168Q8NDH2 2452 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 A8MXE2 369 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 HMGB1P1B2RPK0 211 aaPredicted RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 KDM4EB2RXH2 506 aaPredicted RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 SEC14L5O43304 696 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 SLC22A3O75751 556 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 CPSF4O95639 269 aaKnown RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 NUDT14O95848 222 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 TGM6O95932 706 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 KITP10721 976 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 UBL4AP11441 157 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 FKBP2P26885 142 aaKnown RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 CLDN15P56746 228 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 ZNF117Q03924 483 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 CBFBQ13951 182 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 DAZAP2Q15038 168 aaPredicted RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 CD226Q15762 336 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 EIF3MQ7L2H7 374 aaKnown RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 GATSQ8NAP1 163 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 OR5D16Q8NGK9 328 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 OR5W2Q8NH69 310 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 ARSGQ96EG1 525 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 OTUB1Q96FW1 271 aaPredicted RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 SH3YL1Q96HL8 342 aaPredicted RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 SLC35A5Q9BS91 424 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 RBM24Q9BX46 236 aaKnown RBP12.55□□□□□ -0.4
SEC13-204ENST00000397099 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 OR51I1Q9H343 314 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 RMND5AQ9H871 391 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 ICAM5Q9UMF0 924 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 SLC35A3Q9Y2D2 325 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 EMC9Q9Y3B6 208 aa12.55□□□□□ -0.4
SEC13-204ENST00000397099 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 SERINC4A6NH21 518 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 CCDC154A6NI56 674 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 C17orf51A8MQB3 221 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 EIF1AYO14602 144 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 UBDO15205 165 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 KIAA0513O60268 411 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 TNFSF13O75888 250 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 SYNGR4O95473 234 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 KRT75O95678 551 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 LINGO3P0C6S8 592 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 CD8BP10966 210 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 EPXP11678 715 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 PSMA4P25789 261 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 SUCLG1P53597 346 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 CLDN20P56880 219 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 UFM1P61960 85 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 PHC1P78364 1004 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 FOXF2Q12947 444 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms