RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SPINT1O43278 529 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 TRHRP34981 398 aaPredicted RBP22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 STXBP1P61764 594 aaKnown RBP22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 SLC25A35Q3KQZ1 300 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 TCEAL5Q5H9L2 206 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 SIRT6Q8N6T7 355 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 UBE2E3Q969T4 207 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 BBS4Q96RK4 519 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 KLHL31Q9H511 634 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 BABAM2Q9NXR7 383 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 CHST2Q9Y4C5 530 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 PGRMC2O15173 223 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 WNT1P04628 370 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 FCER2P06734 321 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 SHC2P98077 582 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 TSPAN31Q12999 210 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 NUDT13Q86X67 352 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 ACTR6Q9GZN1 396 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 NUP210Q8TEM1 1887 aaPredicted RBP22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 KRBOX1C9JBD0 128 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 C6P13671 934 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 ACADLP28330 430 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 LRRTM4Q86VH4 590 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 PTP4A1Q93096 173 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 AMDHD1Q96NU7 426 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 H2AFY2Q9P0M6 372 aaPredicted RBP22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 FLVCR2Q9UPI3 526 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 BAIAP2Q9UQB8 552 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 IRAK3Q9Y616 596 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 NOTCH4Q99466 2003 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 CXCL2P19875 107 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 POU3F2P20265 443 aaPredicted RBP22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 HTR1FP30939 366 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 MMP15P51511 669 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 ZNF793Q6ZN11 406 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 OVCH2Q7RTZ1 564 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 UBE3DQ7Z6J8 389 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 LINC00518Q8N0U6 118 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 AIF1LQ9BQI0 150 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 FAM83CQ9BQN1 747 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 LDAHQ9H6V9 325 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 HMX1Q9NP08 348 aaPredicted RBP22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 KLHL1Q9NR64 748 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 ACSL5Q9ULC5 683 aa22.35■■□□□ 1.17
CSNK1E-203ENST00000396832 TRABD2BA6NFA1 517 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 PROS1P07225 676 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 C4BPBP20851 252 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 AHRP35869 848 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 FAM198BQ6UWH4 519 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 Q6ZTK2 550 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 SFTPA1Q8IWL2 248 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 ELMOD3Q96FG2 381 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 FAIM2Q9BWQ8 316 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 C20orf85Q9H1P6 137 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 CD93Q9NPY3 652 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 RPS6KB2Q9UBS0 482 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 GLS2Q9UI32 602 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 A0A0G2JK05 382 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 POM121CA8CG34 1229 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 TFP02787 698 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 TBXA2RP21731 343 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 SLC16A1P53985 500 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 ZNF311Q5JNZ3 666 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 ARL9Q6T311 187 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 CMIPQ8IY22 773 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 STPG2Q8N412 459 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 KAT2AQ92830 837 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 RAD51AP1Q96B01 352 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 SARGQ9BW04 601 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 SAGE1Q9NXZ1 904 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 MYO15AQ9UKN7 3530 aa22.34■■□□□ 1.17
CSNK1E-203ENST00000396832 PEX14O75381 377 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 UBL3O95164 117 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 F8A1P23610 371 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 IFNGR2P38484 337 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 SHEQ5VZ18 495 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 CEACAM19Q7Z692 300 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 NRMQ8IXM6 262 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 COQ8AQ8NI60 647 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 C4orf51C9J302 202 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 L7N2F9 121 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 EPHA4P54764 986 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 SFRP4Q6FHJ7 346 aaPredicted RBP22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 LRFN4Q6PJG9 635 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 PRSS45Q7RTY3 260 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 C12orf40Q86WS4 652 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 OR51Q1Q8NH59 317 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 TMEM255BQ8WV15 326 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 THAP4Q8WY91 577 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 GSDMCQ9BYG8 508 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 SLC13A4Q9UKG4 626 aa22.33■■□□□ 1.17
CSNK1E-203ENST00000396832 A8MXK9 166 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 TEX46H3BTG2 121 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 LPLP06858 475 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 NMBP08949 121 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 MRPL3P09001 348 aaKnown RBP22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 KIAA1024LP59773 190 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 BDH1Q02338 343 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 TMEM44Q2T9K0 475 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 ZNF697Q5TEC3 545 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms