RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SUSD6Q92537 303 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 THAP7Q9BT49 309 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 PRSS16Q9NQE7 514 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 TMA7Q9Y2S6 64 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 ZNF780BQ9Y6R6 833 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 SCN2AQ99250 2005 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 A0A1B0GVC2 190 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 A6NIN4 97 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 OR52A4PA6NMU1 304 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 PAICSP22234 425 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 DRD3P35462 400 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 FAM209AQ5JX71 171 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 FAM27D1Q5T7N8 215 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 MEPCEQ7L2J0 689 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 OR2L3Q8NG85 312 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 OR7G2Q8NG99 324 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 RFT1Q96AA3 541 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 CITED4Q96RK1 184 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 PRSS27Q9BQR3 290 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 HCAR1Q9BXC0 346 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 ENKD1Q9H0I2 346 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 OR52D1Q9H346 318 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 SPHK1Q9NYA1 384 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 CENPVL1A0A0U1RR11 272 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 TBC1D3BA6NDS4 549 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 PCDH8O95206 1070 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 BTCP35070 178 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 RFX3P48380 749 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 ZNF136P52737 540 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 OR10A3P58181 314 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 MFSD12Q6NUT3 480 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 USP34Q70CQ2 3546 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 ZNF767PQ75MW2 155 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 GPR135Q8IZ08 494 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 BRIX1Q8TDN6 353 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 DPH1Q9BZG8 443 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 WDR26Q9H7D7 661 aa17.05■□□□□ 0.32
PCDHA1-202ENST00000394633 A0A0A6YYJ9 748 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 UNC119BA6NIH7 251 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 E9PI62 339 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 RGS19P49795 217 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 HTR4Q13639 388 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 KRT33BQ14525 404 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 FAM205BPQ63HN1 556 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 OAFQ86UD1 273 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 NRROSQ86YC3 692 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 C9orf62Q8N4C0 152 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 SAMD12Q8N8I0 201 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 KISS1RQ969F8 398 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 RAB11FIP5Q9BXF6 653 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 C1QTNF2Q9BXJ5 285 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 ZNF223Q9UK11 482 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 RASD1Q9Y272 281 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 GPSM3Q9Y4H4 160 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 GSAPA4D1B5 854 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 POU3F3P20264 500 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 RBMS1P29558 406 aaKnown RBP17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 IRF4Q15306 451 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 FCN2Q15485 313 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 BICRALQ6AI39 1079 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 CDC73Q6P1J9 531 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 ARL9Q6T311 187 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 WDR88Q6ZMY6 472 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 DGLUCYQ7Z3D6 616 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 MFSD9Q8NBP5 474 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 TOR1AIP2Q8NFQ8 470 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 OR5W2Q8NH69 310 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 FANK1Q8TC84 345 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 AHCYL2Q96HN2 611 aaKnown RBP17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 HYLS1Q96M11 299 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 SARGQ9BW04 601 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 ABCG5Q9H222 651 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 MTHFD2LQ9H903 347 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 FOLH1BQ9HBA9 442 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 SLC23A1Q9UHI7 598 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 NCKAP1Q9Y2A7 1128 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 WDR45Q9Y484 360 aa17.04■□□□□ 0.32
PCDHA1-202ENST00000394633 DAPL1A0PJW8 107 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 BHLHE40O14503 412 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 CHP2O43745 196 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 KAT7O95251 611 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 ASGR2P07307 311 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 MAKP20794 623 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 AHCYP23526 432 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 TALDO1P37837 337 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 OR3A3P47888 321 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 ARPC4P59998 168 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 SNRPNP63162 240 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 BTN3A2P78410 334 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 GALEQ14376 348 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 SFXN4Q6P4A7 337 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 SRFBP1Q8NEF9 429 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 OR5H6Q8NGV6 325 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 KCTD12Q96CX2 325 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 MS4A4EQ96PG1 132 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 FN3KQ9H479 309 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 TRIM36Q9NQ86 728 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 CACNG2Q9Y698 323 aa17.03■□□□□ 0.32
PCDHA1-202ENST00000394633 A0A0G2JK05 382 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms