RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CCDC85BQ15834 202 aaPredicted RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 MBOAT2Q6ZWT7 520 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 SYT9Q86SS6 491 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 VWA5B2Q8N398 1253 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 OR13C5Q8NGS8 318 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 OR13C2Q8NGS9 318 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 UPRTQ96BW1 309 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 GFM1Q96RP9 751 aaKnown RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 KIR3DX1Q9H7L2 352 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 RNF121Q9H920 327 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 TRAV27A0A087WT01 109 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 A0A0G2JMP0 313 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 A0A0X1KG70 313 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 TRDV1A0A1B0GX56 115 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 HMX3A6NHT5 357 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 LRRC72A6NJI9 287 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 CENPXA8MT69 81 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 HCRTR1O43613 425 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 GUCY1B2O75343 617 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 POLR2CP19387 275 aaPredicted RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 ELK1P19419 428 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 SHC1P29353 583 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC16A1P53985 500 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 DECR1Q16698 335 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF542PQ5EBM4 170 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 SNAP47Q5SQN1 464 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 Q6ZS52 159 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 VASH1Q7L8A9 365 aaPredicted RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF761Q86XN6 746 aaPredicted RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 TDHQ8IZJ6 230 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 GHDCQ8N2G8 530 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 OR4M2Q8NGB6 313 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 SDF2Q99470 211 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 WACQ9BTA9 647 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 MED18Q9BUE0 208 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 OR52D1Q9H346 318 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 MOV10Q9HCE1 1003 aaKnown RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 TNFRSF10DQ9UBN6 386 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 ALG5Q9Y673 324 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 MTCH2Q9Y6C9 303 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 GXYLT2A0PJZ3 443 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 ADAM11O75078 769 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 PAHP00439 452 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 FGF9P31371 208 aaPredicted RBP12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 ALG11Q2TAA5 492 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 RNASE12Q5GAN4 147 aaKnown RBP12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 MRPL2Q5T653 305 aaKnown RBP12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 IDNKQ5T6J7 187 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 HEPHL1Q6MZM0 1159 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 LRRC25Q8N386 305 aaPredicted RBP12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 LINC00471Q8N535 108 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 GDPD1Q8N9F7 314 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 OR51A7Q8NH64 312 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 ENKURQ8TC29 256 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 GRHL3Q8TE85 626 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 OSTF1Q92882 214 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 FRMD6Q96NE9 622 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 SOSTQ9BQB4 213 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 OR51V1Q9H2C8 321 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 SRMSQ9H3Y6 488 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 NPAP1Q9NZP6 1156 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 CLEC4AQ9UMR7 237 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 GSTK1Q9Y2Q3 226 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 HEBP2Q9Y5Z4 205 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 LRP4O75096 1905 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 SHISA7A6NL88 538 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 GNB5O14775 395 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 RGS13O14921 159 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 CT62P0C5K7 136 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 LSSP48449 732 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 EVX1P49640 407 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 PPP1CAP62136 330 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 EEF1A1P68104 462 aaKnown RBP12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 ABATP80404 500 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 GNA13Q14344 377 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 CEBPEQ15744 281 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 TATDN3Q17R31 274 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 PRRT3Q5FWE3 981 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 C1QTNF12Q5T7M4 302 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 CDC73Q6P1J9 531 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 DGAT2L6Q6ZPD8 337 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF438Q7Z4V0 828 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 ASPGQ86U10 573 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 KLHL36Q8N4N3 616 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 OR2T33Q8NG76 320 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 PTP4A1Q93096 173 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 DEPDC7Q96QD5 511 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 OR2B2Q9GZK3 357 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 TCEAL2Q9H3H9 227 aaPredicted RBP12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 CDH10Q9Y6N8 788 aa12.51□□□□□ -0.41
GTF2F1-201ENST00000394456 SPTBP11277 2137 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 COL6A3P12111 3177 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 SDK1Q7Z5N4 2213 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms