RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ISOC1Q96CN7 298 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 CLIP3Q96DZ5 547 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 LOXL4Q96JB6 756 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 LCORQ96JN0 433 aaPredicted RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 CCDC90BQ9GZT6 254 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ARRDC1-AS1Q9H2J1 176 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 DSN1Q9H410 356 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 FLRT3Q9NZU0 649 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 PRKNO60260 465 aaPredicted RBP13.78□□□□□ -0.2
CCT4-201ENST00000394440 GPR143P51810 404 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 NUDT6P53370 316 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 TRA2AQ13595 282 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCT4-201ENST00000394440 PHF19Q5T6S3 580 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 FNDC7Q5VTL7 733 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 RNF113BQ8IZP6 322 aaKnown RBP13.78□□□□□ -0.2
CCT4-201ENST00000394440 BMPERQ8N8U9 685 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 FAM71CQ8NEG0 241 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 OR1N1Q8NGS0 311 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 EXPH5Q8NEV8 1989 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 AGRPO00253 132 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 HBQ1P09105 142 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 GP2P55259 537 aaKnown RBP13.78□□□□□ -0.2
CCT4-201ENST00000394440 FOXL2P58012 376 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 DCAF7P61962 342 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 EFNB1P98172 346 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 MVKQ03426 396 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 TCF15Q12870 199 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 KLHL26Q53HC5 615 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 B3GNT6Q6ZMB0 384 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 PRR23CQ6ZRP0 262 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 BPHLQ86WA6 291 aaPredicted RBP13.78□□□□□ -0.2
CCT4-201ENST00000394440 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
CCT4-201ENST00000394440 COPS4Q9BT78 406 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 ZNF426Q9BUY5 554 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 POLDIP3Q9BY77 421 aaKnown RBP13.78□□□□□ -0.2
CCT4-201ENST00000394440 AMBNQ9NP70 447 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 PCDHGB2Q9Y5G2 931 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
CCT4-201ENST00000394440 VSTM2BA6NLU5 285 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 TO15178 435 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ADH7P40394 386 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 STAT5AP42229 794 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 GRK6P43250 576 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 SLC15A1P46059 708 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 DCDP81605 110 aaKnown RBP13.77□□□□□ -0.21
CCT4-201ENST00000394440 GINS1Q14691 196 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ACSM5Q6NUN0 579 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 CASP12Q6UXS9 341 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 SHISA6Q6ZSJ9 500 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 SVOPQ8N4V2 548 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 TMEM239Q8WW34 195 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ACOT13Q9NPJ3 140 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 IL20Q9NYY1 176 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 C2orf92A0A1B0GVN3 265 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 A0A1B0GWA3 101 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 CHP2O43745 196 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 INMTO95050 263 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 CDK1P06493 297 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 GP1BAP07359 652 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ACP1P24666 158 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 PCSK6P29122 969 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 MAP2K4P45985 399 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 GPR4P46093 362 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 OCA2Q04671 838 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 PLA2G2CQ5R387 149 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 OVCH1Q7RTY7 1134 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ZNF550Q7Z398 422 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 LSRQ86X29 649 aaPredicted RBP13.77□□□□□ -0.21
CCT4-201ENST00000394440 CLDN22Q8N7P3 220 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 ZNF441Q8N8Z8 693 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 TRIM2Q9C040 744 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 TMEM27Q9HBJ8 222 aa13.77□□□□□ -0.21
CCT4-201ENST00000394440 KIF26BQ2KJY2 2108 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 TRIM64BA6NI03 449 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 OR6C76A6NM76 312 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 EFCAB7A8K855 629 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 ZNF99A8MXY4 864 aaPredicted RBP13.76□□□□□ -0.21
CCT4-201ENST00000394440 IDSB3KWA1 339 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 CNOT3O75175 753 aaKnown RBP13.76□□□□□ -0.21
CCT4-201ENST00000394440 SMSP52788 366 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 IL11RAQ14626 422 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 SLC25A30Q5SVS4 291 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 WDR36Q8NI36 951 aaKnown RBP13.76□□□□□ -0.21
CCT4-201ENST00000394440 TEX47Q8TBZ9 253 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 C12orf43Q96C57 262 aaKnown RBP13.76□□□□□ -0.21
CCT4-201ENST00000394440 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 WWTR1Q9GZV5 400 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 HOXD1Q9GZZ0 328 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 NAA50Q9GZZ1 169 aaKnown RBP13.76□□□□□ -0.21
CCT4-201ENST00000394440 SLC26A1Q9H2B4 701 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 UBQLN4Q9NRR5 601 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 CLN6Q9NWW5 311 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms