RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RNF144AP50876 292 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 CELF5Q8N6W0 485 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 OR6K3Q8NGY3 331 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 UTP23Q9BRU9 249 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ZNF649Q9BS31 505 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 SGK2Q9HBY8 427 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 STOX2Q9P2F5 926 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 MYEF2Q9P2K5 600 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 RASD1Q9Y272 281 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 SNRPGP15A8MWD9 76 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 NRG2O14511 850 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 RAD1O60671 282 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 EIF3GO75821 320 aaKnown RBP eCLIP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 MT-ND4P03905 459 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 WNT1P04628 370 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ANKRD34CP0C6C1 535 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 CTSAP10619 480 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 MECP2P51608 486 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 DEFB103AP81534 67 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 DHRS7BQ6IAN0 325 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 LILRA6Q6PI73 481 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 C5orf46Q6UWT4 87 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 OR51Q1Q8NH59 317 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 VWCEQ96DN2 955 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 WRAP53Q9BUR4 548 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 RIOK2Q9BVS4 552 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 CHIAQ9BZP6 476 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ZBP1Q9H171 429 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 TEX10Q9NXF1 929 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 FBXW2Q9UKT8 454 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 A0A0G2JPF8 293 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 HNRNPCL3B7ZW38 293 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PRR23D1E9PI22 279 aaPredicted RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 SULT1C2O00338 296 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 SGCEO43556 437 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PRR23D2P0DMB1 279 aaPredicted RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 HNRNPCL4P0DMR1 293 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 CD53P19397 219 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PVALBP20472 110 aaPredicted RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PSMB1P20618 241 aaKnown RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 DGCR2P98153 550 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 HENMT1Q5T8I9 393 aaKnown RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 SLC25A25Q6KCM7 469 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 ACSM5Q6NUN0 579 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 TCTN3Q6NUS6 607 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 HAGHLQ6PII5 290 aaPredicted RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 TRMT10AQ8TBZ6 339 aaKnown RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 ELP5Q8TE02 316 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PNPLA2Q96AD5 504 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 MED8Q96G25 268 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PTDSS2Q9BVG9 487 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 BCL2L14Q9BZR8 327 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 CCL26Q9Y258 94 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 A0A1W2PRB8 838 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 UPK3BL1B0FP48 263 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 UPK3BL2E5RIL1 263 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 HBA1P69905 142 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 DCDP81605 110 aaKnown RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 SMARCD3Q6STE5 483 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 B3GLCTQ6Y288 498 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 IRF7Q92985 503 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 SGK3Q96BR1 496 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 PLEKHA1Q9HB21 404 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 BARX1Q9HBU1 254 aaPredicted RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 KLF15Q9UIH9 416 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 MRTO4Q9UKD2 239 aaKnown RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 ACSL6Q9UKU0 697 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 CAMK2AQ9UQM7 478 aa17.6■□□□□ 0.41
HOXC6-202ENST00000394331 EXOGQ9Y2C4 368 aaKnown RBP17.6■□□□□ 0.41
HOXC6-202ENST00000394331 RNF13O43567 381 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 IL5P05113 134 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 ANXA4P09525 319 aaPredicted RBP17.59■□□□□ 0.41
HOXC6-202ENST00000394331 CENPAP49450 140 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 NR0B1P51843 470 aaKnown RBP17.59■□□□□ 0.41
HOXC6-202ENST00000394331 RAE1P78406 368 aaKnown RBP17.59■□□□□ 0.41
HOXC6-202ENST00000394331 INSL4Q14641 139 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 ENTPD8Q5MY95 495 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 IL20RBQ6UXL0 311 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 ADIPOR2Q86V24 386 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 C12orf40Q86WS4 652 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 SVBPQ8N300 66 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 KREMEN2Q8NCW0 462 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 BPIFCQ8NFQ6 507 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 SMIM4Q8WVI0 70 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 CA10Q9NS85 328 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 TEX46H3BTG2 121 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 SERPIND1P05546 499 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 OPRD1P41143 372 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 OR56A3Q8NH54 315 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 NANPQ8TBE9 248 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 RFKQ969G6 155 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 ARL6Q9H0F7 186 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 OR51M1Q9H341 326 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 PRM3Q9NNZ6 103 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 SPHK1Q9NYA1 384 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 NTMQ9P121 344 aa17.59■□□□□ 0.41
HOXC6-202ENST00000394331 TSPAN11A1L157 253 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 MID1O15344 667 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 TSPAN6O43657 245 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 LEFTY1O75610 366 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms