RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SHC1P29353 583 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF136P52737 540 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 MVDP53602 400 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ATP12AP54707 1039 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PLAURQ03405 335 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHRNEQ04844 493 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 TFF3Q07654 80 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 FOXF2Q12947 444 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 RCAN2Q14206 197 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 SQLEQ14534 574 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 GANABQ14697 944 aaKnown RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 MAPK11Q15759 364 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 TMEM44Q2T9K0 475 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PLPPR5Q32ZL2 321 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 AGKQ53H12 422 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PAGE3Q5JUK9 113 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ATAD3BQ5T9A4 648 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 RIPPLY2Q5TAB7 128 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 NSUN5P2Q63ZY6 315 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PPP4R4Q6NUP7 873 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ENPP6Q6UWR7 440 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 FRRS1Q6ZNA5 592 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 LACC1Q8IV20 430 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 MSRB3Q8IXL7 192 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 GCNT2Q8N0V5 402 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 TRIML2Q8N7C3 387 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF527Q8NB42 609 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 RELL2Q8NC24 303 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 LILRB4Q8NHJ6 448 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZFP90Q8TF47 636 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ASB5Q8WWX0 329 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 GTF2H4Q92759 462 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 SPDL1Q96EA4 605 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ITCHQ96J02 903 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 RNF145Q96MT1 663 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PIGQQ9BRB3 760 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 TMEM120AQ9BXJ8 343 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 TRIM8Q9BZR9 551 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PAIP1Q9H074 479 aaKnown RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 EXD2Q9NVH0 621 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 FGFR1OP2Q9NVK5 253 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLAMF8Q9P0V8 285 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLCF1Q9UBD9 225 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ICAM5Q9UMF0 924 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 MRPS18CQ9Y3D5 142 aaKnown RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 L3MBTL1Q9Y468 752 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 DTNAQ9Y4J8 743 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PCDHGB3Q9Y5G1 929 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 NINQ8N4C6 2090 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 UNC79Q9P2D8 2635 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ICE1Q9Y2F5 2266 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 MBD3L4A6NDZ8 208 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 MBD3L3A6NE82 208 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 MBD3L5A6NJ08 208 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 CD8B2A6NJW9 211 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 FAM47E-STBD1D6RA91 191 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 AK1P00568 194 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 VIMP08670 466 aaKnown RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 LINGO3P0C6S8 592 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 UBL4AP11441 157 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 COX6B1P14854 86 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 HOXB9P17482 250 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 PSMA4P25789 261 aaKnown RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 LCN1P31025 176 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 CEACAM8P31997 349 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 SFTPDP35247 375 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 PTGER4P35408 488 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 CRATP43155 626 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF41P51814 821 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 PRSS12P56730 875 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 HPCAP84074 193 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 SKP2Q13309 424 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF141Q15928 474 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 HSP90B2PQ58FF3 399 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 BLOC1S3Q6QNY0 202 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 MEX3BQ6ZN04 569 aaKnown RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 GGNQ86UU5 652 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 GRAMD2AQ8IUY3 354 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 MISPQ8IVT2 679 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF619Q8N2I2 560 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 C10orf111Q8N326 155 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 GTPBP8Q8N3Z3 284 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ATP6V1C2Q8NEY4 427 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ANKK1Q8NFD2 765 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 MBD3L2Q8NHZ7 208 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 FBXO27Q8NI29 283 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZPLD1Q8TCW7 415 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 FIG4Q92562 907 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 MAL2Q969L2 176 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 INTS12Q96CB8 462 aaKnown RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 THUMPD3Q9BV44 507 aaKnown RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 PINK1Q9BXM7 581 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 NMUR2Q9GZQ4 415 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 HOXD1Q9GZZ0 328 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC38A1Q9H2H9 487 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 IKZF5Q9H5V7 419 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF385DQ9H6B1 395 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms