RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FAM24BQ8N5W8 94 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 OR10H4Q8NGA5 316 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 OR5D16Q8NGK9 328 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 NEK7Q8TDX7 302 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 C15orf40Q8WUR7 153 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 LINC01599Q8WXQ3 324 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 THRSPQ92748 146 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 WNT2BQ93097 391 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CAPNS2Q96L46 248 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 REG4Q9BYZ8 158 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TRIM36Q9NQ86 728 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 THSD1Q9NS62 852 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ADAM18Q9Y3Q7 739 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PLEKHM1Q9Y4G2 1056 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 KPTNQ9Y664 436 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SRCAPQ6ZRS2 3230 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TARM1B6A8C7 271 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 DPYSL4O14531 572 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PRICKLE3O43900 615 aaPredicted RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TPST2O60704 377 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SEMA7AO75326 666 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PAGE1O75459 146 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TRBC1P01850 177 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TBXA2RP21731 343 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 LMO2P25791 158 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 RAD52P43351 418 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 NPBWR1P48145 328 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PTH2RP49190 550 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 GPR15P49685 360 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 RAG2P55895 527 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TBX4P57082 545 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 YBX1P67809 324 aaKnown RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TLE4Q04727 773 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 EFEMP1Q12805 493 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ECH1Q13011 328 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF791Q3KP31 576 aaPredicted RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CPTPQ5TA50 214 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 MARC1Q5VT66 337 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 HBMQ6B0K9 141 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 DHRS7BQ6IAN0 325 aaPredicted RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 C15orf39Q6ZRI6 1047 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 OR2W3Q7Z3T1 314 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 UNC93AQ86WB7 457 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TRAM1L1Q8N609 369 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 C1orf52Q8N6N3 182 aaKnown RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 LRRC52Q8N7C0 313 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 NANOGP1Q8N7R0 232 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SEMA6DQ8NFY4 1073 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 OR4L1Q8NH43 312 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 APH1BQ8WW43 257 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 EXTL1Q92935 676 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 KCTD12Q96CX2 325 aaKnown RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ASB16Q96NS5 453 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 C16orf70Q9BSU1 422 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 INPP5KQ9BT40 448 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TUBB1Q9H4B7 451 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TDP1Q9NUW8 608 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ZSCAN32Q9NX65 697 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SCN9AQ15858 1988 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 DOCK2Q92608 1830 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 hCG_1809904A0A1W2PP81 198 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 A0A1W2PR64 198 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 A0A1W2PRV1 198 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TRBC2A0A5B9 178 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 A6NLC8 198 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF726A6NNF4 738 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SEC14L6B5MCN3 397 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ARL6IP5O75915 188 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PCDH8O95206 1070 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 IGF2P01344 180 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 QDPRP09417 244 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MTNR1AP48039 350 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DGKGP49619 791 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 HTR6P50406 440 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RENBPP51606 427 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SRSF11Q05519 484 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DUOXA1Q1HG43 343 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SLC39A12Q504Y0 691 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PLA1AQ53H76 456 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM69Q5SWH9 247 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SDHAF4Q5VUM1 108 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DMRTA1Q5VZB9 504 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 LAIR1Q6GTX8 287 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZC3H14Q6PJT7 736 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PAQR6Q6TCH4 344 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SPNS3Q6ZMD2 512 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF321PQ8N8H1 164 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 C22orf15Q8WYQ4 148 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SLC39A7Q92504 469 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RTP3Q9BQQ7 232 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 HAPLN2Q9GZV7 340 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MAN2C1Q9NTJ4 1040 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF226Q9NYT6 803 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 WDR45Q9Y484 360 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 A0A1B0GUH1 482 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 A0A1W2PPK0 400 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CA12O43570 354 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 HCRTO43612 131 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms