RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 SH3YL1Q96HL8 342 aaPredicted RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 GPR137Q96N19 417 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 LAT2Q9GZY6 243 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 DEFB127Q9H1M4 99 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 TSPAN10Q9H1Z9 355 aaPredicted RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 C1orf21Q9H246 121 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 ARMC7Q9H6L4 198 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 ACKR4Q9NPB9 350 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 CARD8Q9Y2G2 431 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 MRPS18CQ9Y3D5 142 aaKnown RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 HRH3Q9Y5N1 445 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 DNAJC13O75165 2243 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 CLDN24A6NM45 220 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 B4DXG7 233 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 HPNP05981 417 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 UBTFL6P0CB48 400 aaPredicted RBP13.57□□□□□ -0.24
SUMO1-203ENST00000392246 EDN3P14138 238 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 SRD5A2P31213 254 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 GSK3BP49841 420 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 P2RX1P51575 399 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 TDGF1P3P51864 188 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 ZNF117Q03924 483 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 TLE1Q04724 770 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 CMPK2Q5EBM0 449 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 ZNF311Q5JNZ3 666 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 C6orf89Q6UWU4 347 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 RINLQ6ZS11 566 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 PATL1Q86TB9 770 aaKnown RBP13.57□□□□□ -0.24
SUMO1-203ENST00000392246 TNIP2Q8NFZ5 429 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 SEC14L3Q9UDX4 400 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 DKKL1Q9UK85 242 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 USP22Q9UPT9 525 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 ZNF443Q9Y2A4 671 aaPredicted RBP13.57□□□□□ -0.24
SUMO1-203ENST00000392246 ZNF407Q9C0G0 2248 aa13.57□□□□□ -0.24
SUMO1-203ENST00000392246 ZGRF1Q86YA3 2104 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 PRRC2CQ9Y520 2896 aaKnown RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 M0QX08 132 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 GMFGO60234 142 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 CDC40O60508 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 GCM2O75603 506 aaPredicted RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 CYP7B1O75881 506 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 CELA3AP09093 270 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 DPP4P27487 766 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 SUMO3P55854 103 aaPredicted RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 EEF1A1P68104 462 aaKnown RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 NDUFAF6Q330K2 333 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 SAMD4BQ5PRF9 694 aaKnown RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 MRPL2Q5T653 305 aaKnown RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 ZNF836Q6ZNA1 936 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 GHDCQ8N2G8 530 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 TMCO5AQ8N6Q1 288 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 FAM71CQ8NEG0 241 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 FAM83FQ8NEG4 500 aaPredicted RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 BHLHE22Q8NFJ8 381 aaPredicted RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 TOR1AIP2Q8NFQ8 470 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 C1GALT1C1Q96EU7 318 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 KCTD14Q9BQ13 255 aaPredicted RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 OR2B2Q9GZK3 357 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 LDAHQ9H6V9 325 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 EXOSC3Q9NQT5 275 aaKnown RBP13.56□□□□□ -0.24
SUMO1-203ENST00000392246 TAS2R1Q9NYW7 299 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 ICAM5Q9UMF0 924 aa13.56□□□□□ -0.24
SUMO1-203ENST00000392246 GTF3C1Q12789 2109 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 CDHR4A6H8M9 788 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 ANKUB1A6NFN9 424 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 OIP5O43482 229 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 SUSD5O60279 629 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 HCN1O60741 890 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 WISP2O76076 250 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 MFN2O95140 757 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 IGHG3P01860 377 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 BNIP1Q12981 228 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 SKP2Q13309 424 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 CBFBQ13951 182 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 SPATS1Q496A3 300 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 TRILQ7L0X0 811 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 ARMC8Q8IUR7 673 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 GRAMD2AQ8IUY3 354 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 OR5W2Q8NH69 310 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 OR14L1PQ8NHC6 308 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 CNOT9Q92600 299 aaKnown RBP13.55□□□□□ -0.24
SUMO1-203ENST00000392246 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 RLIMQ9NVW2 624 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 TAS2R10Q9NYW0 307 aa13.55□□□□□ -0.24
SUMO1-203ENST00000392246 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
SUMO1-203ENST00000392246 A0A087WZY1 265 aa13.54□□□□□ -0.24
SUMO1-203ENST00000392246 TRGV5A0A0B4J1U4 118 aa13.54□□□□□ -0.24
SUMO1-203ENST00000392246 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
SUMO1-203ENST00000392246 GSTA4O15217 222 aa13.54□□□□□ -0.24
SUMO1-203ENST00000392246 ZIC3O60481 467 aa13.54□□□□□ -0.24
SUMO1-203ENST00000392246 BCAS1O75363 584 aaPredicted RBP13.54□□□□□ -0.24
SUMO1-203ENST00000392246 ATP5HO75947 161 aa13.54□□□□□ -0.24
SUMO1-203ENST00000392246 NUDT14O95848 222 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms