RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 KIR2DS1Q14954 304 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 SLMAPQ14BN4 828 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 MORF4L2Q15014 288 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 SMU1Q2TAY7 513 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 AARDQ4LEZ3 155 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 PIGGQ5H8A4 983 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 IL23RQ5VWK5 629 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 NANOGP8Q6NSW7 305 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CLEC4GQ6UXB4 293 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 HACD2Q6Y1H2 254 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF836Q6ZNA1 936 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ARMCX2Q7L311 632 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CAMK2N1Q7Z7J9 78 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 SYVN1Q86TM6 617 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 C10orf53Q8N6V4 93 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 TPRX1Q8N7U7 411 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF615Q8N8J6 731 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CCDC54Q8NEL0 328 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 GOT1L1Q8NHS2 421 aaPredicted RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 GDAP1Q8TB36 358 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 SELENOMQ8WWX9 145 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 P3H4Q92791 437 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 MS4A14Q96JA4 679 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 NOL4LQ96MY1 436 aaPredicted RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ZMAT2Q96NC0 199 aaKnown RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 OR2M2Q96R28 347 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 COQ7Q99807 217 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CBWD1Q9BRT8 395 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CACNG6Q9BXT2 260 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 FTHL17Q9BXU8 183 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 MRPL9Q9BYD2 267 aaKnown RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 GPR61Q9BZJ8 451 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 MAGT1Q9H0U3 335 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 PPDPFQ9H3Y8 114 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CALHM2Q9HA72 323 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 STARD5Q9NSY2 213 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 GDAP2Q9NXN4 497 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 TREM2Q9NZC2 230 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 DNAJB9Q9UBS3 223 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 MTRF1LQ9UGC7 380 aaKnown RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 OR12D3Q9UGF7 316 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 FAM153AQ9UHL3 310 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 APPL1Q9UKG1 709 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 DUSP12Q9UNI6 340 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 MAD1L1Q9Y6D9 718 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 PTPRUQ92729 1446 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 PDS5BQ9NTI5 1447 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 TRAV40A0A0B4J280 105 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 TRBV2A0A0J9YWF9 115 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 IGHV3-64DA0A0J9YX35 117 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 FBLL1A6NHQ2 334 aaKnown RBP0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC69A6NI79 296 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 KRTAP4-16G5E9R7 235 aaPredicted RBP0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ALOX15BO15296 676 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 TRAF3IP2O43734 574 aaPredicted RBP0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ECI2O75521 394 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 STX11O75558 287 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CBR3O75828 277 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 SLITRK3O94933 977 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 GSTT2P0CG29 244 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 GSTT2BP0CG30 244 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF286BP0CG31 522 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 POU2F1P14859 743 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CRISP2P16562 243 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 HNF1AP20823 631 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ATP5A1P25705 553 aaKnown RBP0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ANXA13P27216 316 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ATP5DP30049 168 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 HOXA9P31269 272 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC26A3P40879 764 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC6A8P48029 635 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 PITPNBP48739 271 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 LHX2P50458 406 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CCL11P51671 97 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CCR6P51684 374 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 MTTPP55157 894 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 NME5P56597 212 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 KIAA1024LP59773 190 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ARF5P84085 180 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 MYBPC1Q00872 1141 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC173Q0VFZ6 552 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ARL6IP1Q15041 203 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 CDKN3Q16667 212 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 DEFB116Q30KQ4 102 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF699Q32M78 642 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 AGKQ53H12 422 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 LINC00483Q53H64 154 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 C1orf146Q5VVC0 180 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 LIPNQ5VXI9 398 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 C6orf89Q6UWU4 347 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 UNQ9370/PRO34162Q6UXP9 181 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF562Q6V9R5 426 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM220AQ7Z4H9 259 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 HMGN2P46Q86SG4 172 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 C17orf82Q86X59 251 aaPredicted RBP0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 MMAAQ8IVH4 418 aaKnown RBP0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 STKLD1Q8NE28 680 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 OR52I1Q8NGK6 324 aa0.71□□□□□ -2.3
SNORD28B-201ENST00000390993 OR9A4Q8NGU2 314 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms