RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MARCH3Q86UD3 253 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 LCA5Q86VQ0 697 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 C4orf19Q8IY42 314 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPR65Q8IYL9 337 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 PRSS58Q8IYP2 241 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 LRRC75A-AS1Q8N1F1 130 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 PNKDQ8N490 385 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 KIF2BQ8N4N8 673 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 DHRSXQ8N5I4 330 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF781Q8N8C0 355 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MINDY2Q8NBR6 621 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF420Q8TAQ5 688 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 NOC3LQ8WTT2 800 aaKnown RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ANKRD49Q8WVL7 239 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 METTL21AQ8WXB1 218 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MUL1Q969V5 352 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 RILPL2Q969X0 211 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MRGPRFQ96AM1 343 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MOB3AQ96BX8 217 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 OTUB1Q96FW1 271 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF274Q96GC6 653 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CDHR1Q96JP9 859 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCNL2Q96S94 520 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCDC3Q9BQI4 270 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 KATNB1Q9BVA0 655 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ANKRD60Q9BZ19 345 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM192AQ9GZU8 254 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC26A1Q9H2B4 701 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 Q9H3A6 140 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRPV5Q9NQA5 729 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM206AQ9NX38 181 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM161AQ9NX61 479 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 OBP2AQ9NY56 170 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MIS18AQ9NYP9 233 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MRPL27Q9P0M9 148 aaKnown RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 HSPB7Q9UBY9 170 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 HS3ST2Q9Y278 367 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 KNSTRNQ9Y448 316 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 LHFPL6Q9Y693 200 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCDC88AQ3V6T2 1871 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 SCN3AQ9NY46 2000 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPRASP1Q5JY77 1395 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 LRRK1Q38SD2 2015 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 TROQ12816 1431 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 TTC36A6NLP5 189 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 AQP12BA6NM10 295 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ALG1L2C9J202 215 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 C9J4A7 227 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 E7EQL1 145 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 SPECC1L-ADORA2AF8WAN1 911 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 H0Y3Z8 333 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRIM77I1YAP6 450 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZBTB5O15062 677 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 NPIPB7O75200 414 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 NDUFS3O75489 264 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 FGF18O76093 207 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF682O95780 498 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 LGI1O95970 557 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 YES1P07947 543 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 PDGFRBP09619 1106 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 P0DMU3 169 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM231AP0DMU4 169 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM231CP0DMU5 169 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 HOXB8P17481 243 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 LOXP28300 417 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCR7P32248 378 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 PRPHP41219 470 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAGEA4P43358 317 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 RPS11P62280 158 aaKnown RBP eCLIP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 SNRPEP62304 92 aaKnown RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 DYNLL1P63167 89 aaKnown RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 BEX3Q00994 111 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 LIPEQ05469 1076 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 FUT5Q11128 374 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CHIT1Q13231 466 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 PPIL2Q13356 520 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 IHHQ14623 411 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 PKN2Q16513 984 aaKnown RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 IMPG1Q17R60 797 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPR33Q49SQ1 333 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 MCMDC2Q4G0Z9 681 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 C6orf99Q4VX62 202 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 THEM4Q5T1C6 240 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CSAG1Q6PB30 78 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 FOXI2Q6ZQN5 318 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 BNIPLQ7Z465 357 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 HSD17B13Q7Z5P4 300 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 LHFPL1Q86WI0 220 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF573Q86YE8 665 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 FBXW8Q8N3Y1 598 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ARL14Q8N4G2 192 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 Q8NAQ8 132 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRPV1Q8NER1 839 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRAF3IP1Q8TDR0 691 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 RXFP2Q8WXD0 754 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ITFG2Q969R8 447 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CSPG4P5Q96PW8 444 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CYP2S1Q96SQ9 504 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 KCTD14Q9BQ13 255 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 BTBD10Q9BSF8 475 aa-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms