RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PRDM7Q9NQW5 492 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 IL20Q9NYY1 176 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 A0A0A6YYJ9 748 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 REM1O75628 298 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 MRPL3P09001 348 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ZGLP1P0C6A0 271 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 SPTBP11277 2137 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 CCNJQ5T5M9 372 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 AMIGO1Q86WK6 493 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 SAMD12Q8N8I0 201 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 TRIM63Q969Q1 353 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 PHF21AQ96BD5 680 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 OR2M4Q96R27 311 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ADAM29Q9UKF5 820 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 RNF13O43567 381 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 CLEC3AO75596 197 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ATP5A1P25705 553 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 CMPK1P30085 196 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 HTR1FP30939 366 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 IFNGR2P38484 337 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ADAM15Q13444 863 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 FCN2Q15485 313 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 PRRT3Q5FWE3 981 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 TIGD3Q6B0B8 471 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ABHD17CQ6PCB6 329 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ARL9Q6T311 187 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 RPTNQ6XPR3 784 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 KRT74Q7RTS7 529 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 LIX1LQ8IVB5 337 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 OR2L8Q8NGY9 312 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC41A3Q96GZ6 507 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 DPH1Q9BZG8 443 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 MYO15AQ9UKN7 3530 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 SGK494L7N484 410 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 FABP7O15540 132 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 EEF1E1O43324 174 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC43A1O75387 559 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 PRG2P13727 222 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 FPR3P25089 353 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 CXXC5Q7LFL8 322 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 HMGB4Q8WW32 186 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ACOT11Q8WXI4 607 aaPredicted RBP15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 OSTF1Q92882 214 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ELP4Q96EB1 424 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 UBQLN3Q9H347 655 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 NIPAL2Q9H841 368 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 OBP2AQ9NY56 170 aa15.12■□□□□ 0.01
NKX3-1-201ENST00000380871 ARHGEF9O43307 516 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 POU3F3P20264 500 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 FXYD6P3P58550 94 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 E2F1Q01094 437 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 MAB21L1Q13394 359 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 KLHL12Q53G59 568 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 MZT2AQ6P582 158 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 GPR135Q8IZ08 494 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 HSD17B8Q92506 261 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 AKAP1Q92667 903 aaKnown RBP eCLIP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 CDS1Q92903 461 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC35A4Q96G79 324 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF764Q96H86 408 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ALG8Q9BVK2 526 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 TRPV4Q9HBA0 871 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ATP13A2Q9NQ11 1180 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 C20orf141Q9NUB4 165 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 DZANK1Q9NVP4 752 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 TEKT2Q9UIF3 430 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 MSRAQ9UJ68 235 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 RASD1Q9Y272 281 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 EXOGQ9Y2C4 368 aaKnown RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SPEGQ15772 3267 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 A0A0B4J203 849 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 KLF4O43474 513 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF888P0CJ79 500 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 UQCRC1P31930 480 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC16A1P53985 500 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 MTFR2Q6P444 385 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 METAP1DQ6UB28 335 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 TMEM64Q6YI46 380 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 WDR88Q6ZMY6 472 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SYT9Q86SS6 491 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 PLCZ1Q86YW0 608 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 OR2T33Q8NG76 320 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 OR13C5Q8NGS8 318 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 PFN4Q8NHR9 129 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 THAP7Q9BT49 309 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 C1QTNF7Q9BXJ2 289 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ABCG5Q9H222 651 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ENAMQ9NRM1 1142 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 STARD5Q9NSY2 213 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 CES1P1Q9UKY3 287 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 GKN3PP0CG01 181 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 CLUP10909 449 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 F3P13726 295 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC6A1P30531 599 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 BTCP35070 178 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 OR3A3P47888 321 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC3A1Q07837 685 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 C1orf61Q13536 156 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 C17orf47Q8NEP4 570 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms