RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SLC35A3Q9Y2D2 325 aa17.14■□□□□ 0.33
SMN2-202ENST00000380742 CARD8Q9Y2G2 431 aa17.14■□□□□ 0.33
SMN2-202ENST00000380742 SNX13Q9Y5W8 968 aa17.14■□□□□ 0.33
SMN2-202ENST00000380742 IGSF10Q6WRI0 2623 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 CDHR4A6H8M9 788 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 TMEM229AB2RXF0 380 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 GTPBP1O00178 669 aaKnown RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 ARPC2O15144 300 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 ZNF264O43296 627 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 GLSO94925 669 aaPredicted RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 RFPL3SP0C7P2 107 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 UBTFL6P0CB48 400 aaPredicted RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 UBL4AP11441 157 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 CD247P20963 164 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 PRKAR1BP31321 381 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 SKP2Q13309 424 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 TRIM25Q14258 630 aaKnown RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 CYBRD1Q53TN4 286 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 RNFT1Q5M7Z0 435 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 RNF220Q5VTB9 566 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 DHRS4L2Q6PKH6 230 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 PLCZ1Q86YW0 608 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 CMIPQ8IY22 773 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 FADS6Q8N9I5 356 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 FAM98AQ8NCA5 519 aaKnown RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 OR2M3Q8NG83 312 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 GPR32P1Q8NGA4 272 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 SLC26A7Q8TE54 656 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 CCDC124Q96CT7 223 aaKnown RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 PINK1Q9BXM7 581 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 TTTY12Q9BZ98 90 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 DSN1Q9H410 356 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 GORASP2Q9H8Y8 452 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 CACYBPQ9HB71 228 aaKnown RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 MAGEL2Q9UJ55 1249 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 FBXL2Q9UKC9 423 aa17.13■□□□□ 0.33
SMN2-202ENST00000380742 BOKQ9UMX3 212 aaPredicted RBP17.13■□□□□ 0.33
SMN2-202ENST00000380742 TLN1Q9Y490 2541 aaKnown RBP17.12■□□□□ 0.33
SMN2-202ENST00000380742 ATRXP46100 2492 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 HCRTR2O43614 444 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 GMFGO60234 142 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 RASAL1O95294 804 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 ENDOUP21128 410 aaKnown RBP17.12■□□□□ 0.33
SMN2-202ENST00000380742 ELAVL4P26378 380 aaKnown RBP17.12■□□□□ 0.33
SMN2-202ENST00000380742 KCNJ5P48544 419 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 B4GALNT2Q8NHY0 566 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 FAM162AQ96A26 154 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 ARSGQ96EG1 525 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 LAT2Q9GZY6 243 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 DNAJB12Q9NXW2 375 aaKnown RBP17.12■□□□□ 0.33
SMN2-202ENST00000380742 ICAM5Q9UMF0 924 aa17.12■□□□□ 0.33
SMN2-202ENST00000380742 ACOT8O14734 319 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 EIF4E2O60573 245 aaKnown RBP17.11■□□□□ 0.33
SMN2-202ENST00000380742 ADAM11O75078 769 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 GMNNO75496 209 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 CYP7B1O75881 506 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 SERPINA1P01009 418 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 ATP6V1B2P21281 511 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 PLGLB1Q02325 96 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 HYAL4Q2M3T9 481 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 CBLL1Q75N03 491 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 GRAMD2AQ8IUY3 354 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 OR10Q1Q8NGQ4 319 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 UTP4Q969X6 686 aaKnown RBP17.11■□□□□ 0.33
SMN2-202ENST00000380742 ASB9Q96DX5 294 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 WFDC6Q9BQY6 131 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 UBQLN3Q9H347 655 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 MMADHCQ9H3L0 296 aaPredicted RBP17.11■□□□□ 0.33
SMN2-202ENST00000380742 ACTR3BQ9P1U1 418 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 SLC7A8Q9UHI5 535 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 C15orf41Q9Y2V0 281 aa17.11■□□□□ 0.33
SMN2-202ENST00000380742 FAM166BA8MTA8 275 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 FRS3O43559 492 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 CBR3O75828 277 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 IFNA14P01570 189 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 FESP07332 822 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 MSX1P28360 303 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 P2RX1P51575 399 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 SELENOWP63302 87 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 INAQ16352 499 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 EIPR1Q53HC9 387 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 CYP2R1Q6VVX0 501 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 SPPL2CQ8IUH8 684 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 TMEM251Q8N6I4 163 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 TMCO5AQ8N6Q1 288 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 LSM14AQ8ND56 463 aaKnown RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 BHLHE22Q8NFJ8 381 aaPredicted RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 OR4K17Q8NGC6 315 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 RASSF5Q8WWW0 418 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 BBC3Q96PG8 261 aaPredicted RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 MUC13Q9H3R2 512 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 DCAF13Q9NV06 445 aaKnown RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 NTNG1Q9Y2I2 539 aa17.1■□□□□ 0.33
SMN2-202ENST00000380742 PRRC2CQ9Y520 2896 aaKnown RBP17.1■□□□□ 0.33
SMN2-202ENST00000380742 LGI1O95970 557 aa17.09■□□□□ 0.33
SMN2-202ENST00000380742 GKN3PP0CG01 181 aa17.09■□□□□ 0.33
SMN2-202ENST00000380742 PRG2P13727 222 aa17.09■□□□□ 0.33
SMN2-202ENST00000380742 MAGEA5P43359 124 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms