RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TMEM52Q8NDY8 209 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 FGF14Q92915 247 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 SERINC2Q96SA4 455 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 TBX5Q99593 518 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 SRMSQ9H3Y6 488 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ADAP2Q9NPF8 381 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 BABAM2Q9NXR7 383 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 CLDND1Q9NY35 253 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 PTGFRNQ9P2B2 879 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 PHF11Q9UIL8 331 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 SLC22A7Q9Y694 548 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 CLCA3PQ9Y6N3 262 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 CDHR4A6H8M9 788 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 E9PI62 339 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 LDB3O75112 727 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 CHRNB1P11230 501 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 PSKH1P11801 424 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 GALP22466 123 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 HLA-DMAP28067 261 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 QPRTQ15274 297 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 OR1Q1Q15612 314 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 FAM27D1Q5T7N8 215 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 PRPF38BQ5VTL8 546 aaKnown RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 TRIQKQ629K1 86 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 PLET1Q6UQ28 207 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 PARM1Q6UWI2 310 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 MEPCEQ7L2J0 689 aaKnown RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 NOXA1Q86UR1 476 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 YAF2Q8IY57 180 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 LNX2Q8N448 690 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 C19orf18Q8NEA5 215 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 FANK1Q8TC84 345 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 TMEM239Q8WW34 195 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 UPRTQ96BW1 309 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 SLX1AQ9BQ83 275 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 TMEM246Q9BRR3 403 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 ALG8Q9BVK2 526 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 YIPF2Q9BWQ6 316 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 NLKQ9UBE8 527 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 PILRAQ9UKJ1 303 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 LYRM1O43325 122 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 TNFSF14O43557 240 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 SCO2O43819 266 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 REM1O75628 298 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 RFPL3O75679 317 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 IFI30P13284 250 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 NID1P14543 1247 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 COL9A1P20849 921 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 BDH1Q02338 343 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 CSTF1Q05048 431 aaKnown RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 SUZ12Q15022 739 aaKnown RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 ITPRIPL2Q3MIP1 535 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 DCST2Q5T1A1 773 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 ENPP7Q6UWV6 458 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 RANBP3LQ86VV4 465 aaPredicted RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 GID4Q8IVV7 300 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 SAMD14Q8IZD0 417 aaPredicted RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 ZNF619Q8N2I2 560 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 LILRB4Q8NHJ6 448 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 TSACCQ96A04 125 aaPredicted RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 HS6ST2Q96MM7 605 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 MYADMQ96S97 322 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 CD180Q99467 661 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 TMEM168Q9H0V1 697 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 FN3KQ9H479 309 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 CD93Q9NPY3 652 aa10.14□□□□□ -0.79
BEST1-201ENST00000378043 MEPEQ9NQ76 525 aaPredicted RBP10.14□□□□□ -0.79
BEST1-201ENST00000378043 A0A0G2JMP0 313 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 A0A0X1KG70 313 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 A0A1W2PQF6 199 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 A6NCN8 305 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 FGF17O60258 216 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 STX11O75558 287 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 TFPIP10646 304 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 UGT2B7P16662 529 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.79
BEST1-201ENST00000378043 NOS3P29474 1203 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 THBS2P35442 1172 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 EIPR1Q53HC9 387 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 ZNF438Q7Z4V0 828 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 SLC37A3Q8NCC5 494 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 OR4M2Q8NGB6 313 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 OR13C2Q8NGS9 318 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 SMAP2Q8WU79 429 aaPredicted RBP10.13□□□□□ -0.79
BEST1-201ENST00000378043 C1QTNF7Q9BXJ2 289 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 PCOLCE2Q9UKZ9 415 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 SIGLEC7Q9Y286 467 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 ALG5Q9Y673 324 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 TICRRQ7Z2Z1 1910 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 SGK494L7N484 410 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 B3GALT2O43825 422 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 RGS9O75916 674 aaPredicted RBP10.13□□□□□ -0.79
BEST1-201ENST00000378043 DBIP07108 87 aaKnown RBP10.13□□□□□ -0.79
BEST1-201ENST00000378043 CLUP10909 449 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 PAICSP22234 425 aaKnown RBP10.13□□□□□ -0.79
BEST1-201ENST00000378043 CFL1P23528 166 aaKnown RBP10.13□□□□□ -0.79
BEST1-201ENST00000378043 NDUFS1P28331 727 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 SHC1P29353 583 aa10.13□□□□□ -0.79
BEST1-201ENST00000378043 MAP3K8P41279 467 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms