RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 HCAR1Q9BXC0 346 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 C1QTNF7Q9BXJ2 289 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 LOC102723532A0A0G2JNH3 316 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 DAPL1A0PJW8 107 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 PRSS38A1L453 326 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 DBPQ10586 325 aaPredicted RBP23.5■■□□□ 1.35
C9orf40-201ENST00000376854 OR1Q1Q15612 314 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 KLHL12Q53G59 568 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 PRPF38BQ5VTL8 546 aaKnown RBP23.5■■□□□ 1.35
C9orf40-201ENST00000376854 FBXO42Q6P3S6 717 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 SERINC2Q96SA4 455 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 MARVELD1Q9BSK0 173 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 WACQ9BTA9 647 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 ZNF350Q9GZX5 532 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 MAU2Q9Y6X3 613 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 SCN3AQ9NY46 2000 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 DOCK8Q8NF50 2099 aa23.5■■□□□ 1.35
C9orf40-201ENST00000376854 A0A0G2JMP0 313 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 A0A0X1KG70 313 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 PLRG1O43660 514 aaKnown RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 TLX1P31314 330 aaPredicted RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 ID2Q02363 134 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 TIGD3Q6B0B8 471 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 NUDT18Q6ZVK8 323 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 ZNF619Q8N2I2 560 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 OR4M2Q8NGB6 313 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 SCARF2Q96GP6 870 aaPredicted RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 MKRN2Q9H000 416 aaKnown RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 SRMSQ9H3Y6 488 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 PIGUQ9H490 435 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 TRIM36Q9NQ86 728 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 SPTBN5Q9NRC6 3674 aaKnown RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 P2RX6O15547 441 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 CPMP14384 443 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 TBXA2RP21731 343 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 GDI1P31150 447 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 EFR3AQ14156 821 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 MRPL2Q5T653 305 aaKnown RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 HBMQ6B0K9 141 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 VASH1Q7L8A9 365 aaPredicted RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 RNF113BQ8IZP6 322 aaKnown RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 OR10H4Q8NGA5 316 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 KISS1RQ969F8 398 aaPredicted RBP23.49■■□□□ 1.35
C9orf40-201ENST00000376854 ADAP2Q9NPF8 381 aa23.49■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3DA0A087WVF3 549 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3IA0A087WXS9 549 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3EA0A087X179 549 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3LB9A6J9 549 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 ORC5O43913 435 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 REM1O75628 298 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3HP0C7X1 549 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 AK4P27144 223 aaPredicted RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 ERP29P30040 261 aaKnown RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 GALEQ14376 348 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 SNAP47Q5SQN1 464 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 DCST2Q5T1A1 773 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3CQ6IPX1 549 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 USP53Q70EK8 1073 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TBC1D3Q8IZP1 549 aaPredicted RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 LNX2Q8N448 690 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 OR5W2Q8NH69 310 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 HDHD2Q9H0R4 259 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TMEM74BQ9NUR3 256 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 CLDND1Q9NY35 253 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 DAPP1Q9UN19 280 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 YBX2Q9Y2T7 364 aaKnown RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 B3GALT2O43825 422 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 SLC43A1O75387 559 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 DBIP07108 87 aaKnown RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 PBX2P40425 430 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 FAPQ12884 760 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 CCDC85BQ15834 202 aaPredicted RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 UBL7Q96S82 380 aaPredicted RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 MYADMQ96S97 322 aa23.48■■□□□ 1.35
C9orf40-201ENST00000376854 C19orf53Q9UNZ5 99 aaPredicted RBP23.48■■□□□ 1.35
C9orf40-201ENST00000376854 TRBV23OR9-2A0A075B6M9 112 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 NPIPA5A0A0B4J1W7 369 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 NPIPA7E9PJI5 369 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 PEX12O00623 359 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 STX11O75558 287 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 NPIPA8P0DM63 369 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 NID1P14543 1247 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 RPS4Y1P22090 263 aaKnown RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 F8A1P23610 371 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 NDUFS1P28331 727 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SHC1P29353 583 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 RPS7P62081 194 aaKnown RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SYCE2Q6PIF2 218 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 ARL9Q6T311 187 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 LIX1LQ8IVB5 337 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SLC37A3Q8NCC5 494 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 OR5M3Q8NGP4 307 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 FGF14Q92915 247 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 TM4SF19Q96DZ7 209 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 OR2A5Q96R48 311 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 IFT27Q9BW83 186 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 PPIL3Q9H2H8 161 aaKnown RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 TRPV5Q9NQA5 729 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 RPRD1BQ9NQG5 326 aaKnown RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 FBXO34Q9NWN3 711 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms