RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 RBM12BQ8IXT5 1001 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 MYLIPQ8WY64 445 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 NSUN5Q96P11 429 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 PTGDR2Q9Y5Y4 395 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 CACNG2Q9Y698 323 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 SIGLEC1Q9BZZ2 1709 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 PCBD1P61457 104 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 GPR17Q13304 367 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 STK11Q15831 433 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 STEAP3Q658P3 488 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 Q6ZVL8 140 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 MPC1LP0DKB6 136 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 MYF6P23409 242 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 RPS26P11Q5JNZ5 115 aaPredicted RBP11.78□□□□□ -0.52
VPS13A-204ENST00000376634 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 MIB2Q96AX9 1013 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 MTHFD2LQ9H903 347 aaPredicted RBP11.78□□□□□ -0.52
VPS13A-204ENST00000376634 P2RX6O15547 441 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 IL1AP01583 271 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 CRTC1Q6UUV9 634 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 PEBP4Q96S96 227 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 TRAV18A0A075B6X5 111 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 A0A1W2PQU0 124 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 TSPAN11A1L157 253 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ACY1Q03154 408 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 PIGFQ07326 219 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 OR2T35Q8NGX2 323 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 SLC19A3Q9BZV2 496 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 PEX10O60683 326 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 HAPLN1P10915 354 aaPredicted RBP11.78□□□□□ -0.52
VPS13A-204ENST00000376634 TMEM71Q6P5X7 295 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 TMEM185AQ8NFB2 350 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ADAMTS19Q8TE59 1207 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 SGK3Q96BR1 496 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 LATO43561 262 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 GPR137BO60478 399 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 C5AR1P21730 350 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ENDOVQ8N8Q3 282 aaKnown RBP11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ELMOD3Q96FG2 381 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 PSAT1Q9Y617 370 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 OR6C65A6NJZ3 312 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF487B1APH4 448 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 RAB35Q15286 201 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 KLHDC8AQ8IYD2 350 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 PAQR8Q8TEZ7 354 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ECHDC3Q96DC8 303 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 OR51E2Q9H255 320 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 CEBPZOSA8MTT3 80 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 HLA-AP01891 365 aaKnown RBP11.78□□□□□ -0.52
VPS13A-204ENST00000376634 BMP4P12644 408 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 SLC7A13Q8TCU3 470 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 INTS14Q96SY0 518 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 GIMAP2Q9UG22 337 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 TAS2R30P59541 319 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 SF3A2Q15428 464 aaKnown RBP11.78□□□□□ -0.52
VPS13A-204ENST00000376634 HMGN3Q15651 99 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 PROX2Q3B8N5 592 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 ZFAND1Q8TCF1 268 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
VPS13A-204ENST00000376634 A0A1W2PPV4 95 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 SULT2B1O00204 365 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 BHLHE40O14503 412 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 ADAMTS4O75173 837 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 DRD5P21918 477 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 BMXP51813 675 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 NECTIN4Q96NY8 510 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 F2RL3Q96RI0 385 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 TCEAL2Q9H3H9 227 aaPredicted RBP11.77□□□□□ -0.52
VPS13A-204ENST00000376634 DMAC2Q9NW81 257 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 POLHQ9Y253 713 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 EIF4EP06730 217 aaKnown RBP11.77□□□□□ -0.52
VPS13A-204ENST00000376634 MMP2P08253 660 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 POU3F2P20265 443 aaPredicted RBP11.77□□□□□ -0.52
VPS13A-204ENST00000376634 FABP6P51161 128 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 WNT4P56705 351 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 EEF1A2Q05639 463 aaKnown RBP11.77□□□□□ -0.52
VPS13A-204ENST00000376634 OR52W1Q6IF63 320 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF585AQ6P3V2 769 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF395Q9H8N7 513 aaPredicted RBP11.77□□□□□ -0.52
VPS13A-204ENST00000376634 RFPL3O75679 317 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 PIGRP01833 764 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 PCGF2P35227 344 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 GRIN2CQ14957 1233 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 HIST2H3PS2Q5TEC6 136 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 FCRLBQ6BAA4 426 aa11.77□□□□□ -0.52
VPS13A-204ENST00000376634 E9PI62 339 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 MPIG6BO95866 241 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 PRKACBP22694 351 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 RING1Q06587 406 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 GK3PQ14409 553 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 RNF151Q2KHN1 245 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 TECRLQ5HYJ1 363 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 IDO2Q6ZQW0 420 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 SYNPRQ8TBG9 265 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 TP53P04637 393 aaPredicted RBP11.77□□□□□ -0.53
VPS13A-204ENST00000376634 PTGER4P35408 488 aa11.77□□□□□ -0.53
VPS13A-204ENST00000376634 SLC11A1P49279 550 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms