RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TYRP1P17643 537 aa13□□□□□ -0.33
MSH5-202ENST00000375740 RGS8P57771 180 aaPredicted RBP13□□□□□ -0.33
MSH5-202ENST00000375740 VSX2P58304 361 aaPredicted RBP13□□□□□ -0.33
MSH5-202ENST00000375740 EFNB1P98172 346 aa13□□□□□ -0.33
MSH5-202ENST00000375740 KIR2DS5Q14953 304 aa13□□□□□ -0.33
MSH5-202ENST00000375740 FHL5Q5TD97 284 aa13□□□□□ -0.33
MSH5-202ENST00000375740 RNF44Q7L0R7 432 aa13□□□□□ -0.33
MSH5-202ENST00000375740 RRM2BQ7LG56 351 aa13□□□□□ -0.33
MSH5-202ENST00000375740 LIX1LQ8IVB5 337 aa13□□□□□ -0.33
MSH5-202ENST00000375740 NKAIN4Q8IVV8 208 aa13□□□□□ -0.33
MSH5-202ENST00000375740 LRRC20Q8TCA0 184 aa13□□□□□ -0.33
MSH5-202ENST00000375740 NR4A3Q92570 626 aa13□□□□□ -0.33
MSH5-202ENST00000375740 OPALINQ96PE5 141 aa13□□□□□ -0.33
MSH5-202ENST00000375740 SDF2Q99470 211 aa13□□□□□ -0.33
MSH5-202ENST00000375740 RERGLQ9H628 205 aa13□□□□□ -0.33
MSH5-202ENST00000375740 CNIH4Q9P003 139 aa13□□□□□ -0.33
MSH5-202ENST00000375740 C19orf53Q9UNZ5 99 aaPredicted RBP13□□□□□ -0.33
MSH5-202ENST00000375740 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
MSH5-202ENST00000375740 SLCO1B1Q9Y6L6 691 aa13□□□□□ -0.33
MSH5-202ENST00000375740 TDRD6O60522 2096 aaKnown RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 FAM221BA6H8Z2 402 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 OR5K3A6NET4 321 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 OR5K4A6NMS3 321 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 CYR61O00622 381 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 PDGFAP04085 211 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 IFNGR2P38484 337 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SMSP52788 366 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SHC2P98077 582 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 GPR68Q15743 365 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SNAPC1Q16533 368 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SDR16C5Q8N3Y7 309 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 CSNK1A1LQ8N752 337 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 RSC1A1Q92681 617 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 FAM46AQ96IP4 442 aaKnown RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 LRR1Q96L50 414 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SAP130Q9H0E3 1048 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 IL21RQ9HBE5 538 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 ADAP2Q9NPF8 381 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 EIF3KQ9UBQ5 218 aaKnown RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 CENPVL1A0A0U1RR11 272 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 OR7A10O76100 309 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 C1QBP02746 253 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 THY1P04216 161 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 NT5EP21589 574 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 EVI2BP34910 448 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SLC9A3P48764 834 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 RHAGQ02094 409 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SYT14P1Q58G82 188 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 ZNF836Q6ZNA1 936 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 PLEKHM3Q6ZWE6 761 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 GDF7Q7Z4P5 450 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 ZNF655Q8N720 491 aaPredicted RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 FGF11Q92914 225 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 GFM1Q96RP9 751 aaKnown RBP12.99□□□□□ -0.33
MSH5-202ENST00000375740 TAPBPLQ9BX59 468 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 PIGUQ9H490 435 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 MCUBQ9NWR8 336 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 C2orf42Q9NWW7 574 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 SPACA6W5XKT8 324 aa12.99□□□□□ -0.33
MSH5-202ENST00000375740 GALR3O60755 368 aaPredicted RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 GPR75O95800 540 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 IGLV3-19P01714 112 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 OMPP47874 163 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 RAB25P57735 213 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 TSPAN31Q12999 210 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 MANEAQ5SRI9 462 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 SLC25A30Q5SVS4 291 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 CREB3L2Q70SY1 520 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 GJD3Q8N144 294 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 CA13Q8N1Q1 262 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 OR8D4Q8NGM9 314 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 SLC7A5P2Q9GIP4 190 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 SGK494L7N484 410 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 PLD2O14939 933 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 ATP1B1P05026 303 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 CTSBP07858 339 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 ATF4P18848 351 aaPredicted RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 HLA-DMAP28067 261 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 RORCP51449 518 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 TAGLNQ01995 201 aaKnown RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 HHEXQ03014 270 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 COL19A1Q14993 1142 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 LARS2Q15031 903 aaKnown RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 QPRTQ15274 297 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 SPHARQ15513 63 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 SLC27A4Q6P1M0 643 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 PAQR6Q6TCH4 344 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 OOSP2Q86WS3 158 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 NANOGP1Q8N7R0 232 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 TEX47Q8TBZ9 253 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 ENKURQ8TC29 256 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms