RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MCOLN1Q9GZU1 580 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 EPHX3Q9H6B9 360 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CSNK1G1Q9HCP0 422 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CD84Q9UIB8 345 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CTNNB1P35222 781 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 DCAF7P61962 342 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SP2Q02086 613 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TAS1R3Q7RTX0 852 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SULF2Q8IWU5 870 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ENTHD1Q8IYW4 607 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SMPDL3BQ92485 455 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ATP13A2Q9NQ11 1180 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TXNL4BQ9NX01 149 aaKnown RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 UBE2J1Q9Y385 318 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 I6L893 689 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 GALTP07902 379 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 THEGLP0DJG4 465 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 THBS3P49746 956 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 OR14C36Q8NHC7 312 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 C22orf15Q8WYQ4 148 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 PHYHIPLQ96FC7 376 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZDHHC5Q9C0B5 715 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SAP130Q9H0E3 1048 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MUTYHQ9UIF7 546 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 NDRG4Q9ULP0 352 aaKnown RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 C9J4A7 227 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SAP18O00422 153 aaKnown RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ARPC1BO15143 372 aaKnown RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 CHRM5P08912 532 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 FPR3P25089 353 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 GATMP50440 423 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF140P52738 457 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF91Q05481 1191 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 PGGHGQ32M88 737 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 KCTD11Q693B1 232 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 TM9SF4Q92544 642 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 DPH2Q9BQC3 489 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 CENPMQ9NSP4 180 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 CA5BQ9Y2D0 317 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 H7C1Q1 480 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SGK494L7N484 410 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 CPT2P23786 658 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SP3Q02447 781 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MAMDC4Q6UXC1 1216 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 NRMQ8IXM6 262 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 CLDN19Q8N6F1 224 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 HERPUD2Q9BSE4 406 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 C2orf42Q9NWW7 574 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 OR1A2Q9Y585 309 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 BEST1O76090 585 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ARAFP10398 606 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 KCNJ5P48544 419 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 POLR2HP52434 150 aaKnown RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF585AQ6P3V2 769 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 KCNRGQ8N5I3 272 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 TMEM239Q8WW34 195 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 BORCS8Q96FH0 119 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 PRR11Q96HE9 360 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 TRMT61BQ9BVS5 477 aaKnown RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 DRGXA6NNA5 263 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 A8MV72 311 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MC1RQ01726 317 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SSX9Q7RTT3 188 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 PHOSPHO1Q8TCT1 267 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 GAL3ST1Q99999 423 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 TSPAN11A1L157 253 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 PDE7AQ13946 482 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 P2RY14Q15391 338 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MFSD6LQ8IWD5 586 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 RDH10Q8IZV5 341 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SERTAD3Q9UJW9 196 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 E9PI62 339 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 C17orf112F2Z3M2 114 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 OR7A17O14581 309 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SOD2P04179 222 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ATP1B1P05026 303 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 LAMP1P11279 417 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 LETMD1Q6P1Q0 360 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SFXN4Q6P4A7 337 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 FAM124AQ86V42 546 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 NAXDQ8IW45 347 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 OR10K1Q8NGX5 313 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SLAMF9Q96A28 289 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 A4GALTQ9NPC4 353 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF701Q9NV72 531 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 A0A1B0GUH1 482 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MTMR11A4FU01 709 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 YKT6O15498 198 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 LY86O95711 162 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 HEXBP07686 556 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF43P17038 809 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MAOBP27338 520 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SPINT3P49223 89 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF133P52736 654 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 BTN1A1Q13410 526 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MSMO1Q15800 293 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 XKR7Q5GH72 579 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms