RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
CXCL12-203ENST00000374429 ELF4Q99607 663 aaPredicted RBP10.06□□□□□ -0.8
CXCL12-203ENST00000374429 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
CXCL12-203ENST00000374429 GSDMCQ9BYG8 508 aa10.06□□□□□ -0.8
CXCL12-203ENST00000374429 NFKBIL1Q9UBC1 381 aaPredicted RBP10.06□□□□□ -0.8
CXCL12-203ENST00000374429 C4orf47A7E2U8 309 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 SLC22A1O15245 554 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 CDC40O60508 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 GPX5O75715 221 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 CFL1P23528 166 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 PCBP3P57721 371 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 RPS15AP62244 130 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 RACK1P63244 317 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 CSNK2BP67870 215 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ST3GAL3Q11203 375 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ZNF846Q147U1 533 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 PYDC2Q56P42 97 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 CLVS2Q5SYC1 327 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 FCRL6Q6DN72 434 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 FAM122CQ6P4D5 195 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 LAPTM4BQ86VI4 370 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 KDM8Q8N371 416 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 SDR9C7Q8NEX9 313 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 TRUB1Q8WWH5 349 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 TRMT61AQ96FX7 289 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 OR2A5Q96R48 311 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 GFM1Q96RP9 751 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 DPYSL5Q9BPU6 564 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 BEX1Q9HBH7 125 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 BRD7Q9NPI1 651 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 LRIT1Q9P2V4 623 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 SSR3Q9UNL2 185 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 GRIP1Q9Y3R0 1128 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 BOD1L1Q8NFC6 3051 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ZIC2O95409 532 aaPredicted RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 RPS19P39019 145 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 DHPSP49366 369 aaPredicted RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 TMEM35AQ53FP2 167 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 DCST2Q5T1A1 773 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 FAM205BPQ63HN1 556 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ASB18Q6ZVZ8 466 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ABI3BPQ7Z7G0 1075 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 LAX1Q8IWV1 398 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 CDK20Q8IZL9 346 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 MFSD9Q8NBP5 474 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 TMEM80Q96HE8 168 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ADOQ96SZ5 270 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 MRPL39Q9NYK5 338 aaKnown RBP10.05□□□□□ -0.8
CXCL12-203ENST00000374429 ADAM18Q9Y3Q7 739 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 HEBP2Q9Y5Z4 205 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 PLXNB3Q9ULL4 1909 aa10.05□□□□□ -0.8
CXCL12-203ENST00000374429 A0A1W2PRG6 482 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 SH3D21A4FU49 640 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 CCNKO75909 580 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 EPPINO95925 133 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 HLA-DQA2P01906 255 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 DRD1P21728 446 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 TNFRSF4P43489 277 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 MTNR1AP48039 350 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 MFSD12Q6NUT3 480 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 OAFQ86UD1 273 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZNF433Q8N7K0 673 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 OR4C15Q8NGM1 316 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZNF563Q8TA94 476 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 CCDC120Q96HB5 630 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 FCRL1Q96LA6 429 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 TSSK2Q96PF2 358 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 C12orf10Q9HB07 376 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 RPRD1BQ9NQG5 326 aaKnown RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 FAM172BPA6NC97 362 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 FAAHO00519 579 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 CSO75390 466 aaKnown RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 MED26O95402 600 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ACP2P11117 423 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZNF10P21506 573 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 SMSP52788 366 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 RPS25P62851 125 aaKnown RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZNHIT3Q15649 155 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 COL13A1Q5TAT6 717 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 GDF7Q7Z4P5 450 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 PAQR7Q86WK9 346 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 KIF18BQ86Y91 864 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 VWA5B2Q8N398 1253 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 LILRB2Q8N423 598 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZNF321PQ8N8H1 164 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 SLC22A8Q8TCC7 542 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 IPCEF1Q8WWN9 437 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 TMEM9Q9P0T7 183 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 MGAT4BQ9UQ53 548 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-203ENST00000374429 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 C12orf71A8MTZ7 269 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 SCO2O43819 266 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZNF254O75437 659 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 CFIP05156 583 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 F13BP05160 661 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 B2MP61769 119 aa10.04□□□□□ -0.8
CXCL12-203ENST00000374429 ZP2Q05996 745 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms