RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PROCP04070 461 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 CD3EP07766 207 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 THBS1P07996 1170 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 PABPC4LP0CB38 370 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 UROSP10746 265 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 HPGDP15428 266 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 SDC1P18827 310 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 ADH6P28332 368 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 LCN1P31025 176 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 CDKN1AP38936 164 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 MANFP55145 182 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 FOXF1Q12946 379 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 PDE7AQ13946 482 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 RNPS1Q15287 305 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TMEM201Q5SNT2 666 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 CLEC6AQ6EIG7 209 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 SEZ6L2Q6UXD5 910 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TRMT10CQ7L0Y3 403 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TUSC5Q8IXB3 177 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF619Q8N2I2 560 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 COX18Q8N8Q8 333 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 OR2T11Q8NH01 316 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 B4GALNT2Q8NHY0 566 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 ZFP28Q8NHY6 868 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 SMAP2Q8WU79 429 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 CPNE4Q96A23 557 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 PPCDCQ96CD2 204 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TRMT61AQ96FX7 289 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 REXO5Q96IC2 774 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 FCRL1Q96LA6 429 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TSSK3Q96PN8 268 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 CCT7Q99832 543 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 IQCGQ9H095 443 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 SLCO5A1Q9H2Y9 848 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 REEP4Q9H6H4 257 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 ESRP2Q9H6T0 727 aaKnown RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 LRTM1Q9HBL6 345 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 ACSS1Q9NUB1 689 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 C1orf109Q9NX04 203 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 KLHL13Q9P2N7 655 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 PSMC3IPQ9P2W1 217 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 LIPT1Q9Y234 373 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 A0A1W2PPM1 405 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 OIP5O43482 229 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 ALOX5P09917 674 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 EFNA1P20827 205 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-202ENST00000374426 IL32P24001 234 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 ELK4P28324 431 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 IDUAP35475 653 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 ACVR1BP36896 505 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 EIF1P41567 113 aaKnown RBP12.25□□□□□ -0.45
CXCL12-202ENST00000374426 SERPINB4P48594 390 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 DNAJB13P59910 316 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 NAA20P61599 178 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF117Q03924 483 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 PGGHGQ32M88 737 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF672Q499Z4 452 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-202ENST00000374426 CFAP157Q5JU67 520 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 CBLN3Q6UW01 205 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 DNM1P46Q6ZS02 220 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 Q6ZSR9 355 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 KBTBD8Q8NFY9 601 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 CLHC1Q8NHS4 586 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 HSD17B8Q92506 261 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 KISS1RQ969F8 398 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-202ENST00000374426 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
CXCL12-202ENST00000374426 C16orf45Q96MC5 204 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-202ENST00000374426 COQ10BQ9H8M1 238 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 GP6Q9HCN6 339 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 NGBQ9NPG2 151 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 TIGARQ9NQ88 270 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 SH3BP4Q9P0V3 963 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 BAIAP2L1Q9UHR4 511 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 SVEP1Q4LDE5 3571 aa12.25□□□□□ -0.45
CXCL12-202ENST00000374426 DPRXA6NFQ7 191 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF814B7Z6K7 855 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 SLC28A1O00337 649 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF195O14628 629 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 PLIN3O60664 434 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 NDUFS7O75251 213 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 GLRA3O75311 464 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ADAP00813 363 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 IGHV4-39P01824 125 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 RNF144AP50876 292 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 POU6F2P78424 691 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ITGADQ13349 1161 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 P2RY6Q15077 328 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 TOMM34Q15785 309 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 TMEM176BQ3YBM2 270 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 RFTN2Q52LD8 501 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ZCCHC12Q6PEW1 402 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 FCRLAQ7L513 359 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 BANPQ8N9N5 519 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 FBXO27Q8NI29 283 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 PIWIL2Q8TC59 973 aaKnown RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 PHOSPHO1Q8TCT1 267 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms