RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 LINC01553A4QN01 128 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 OXSR1O95747 527 aaPredicted RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 DNAJB1P25685 340 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 HLA-FP30511 346 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 PPP5CP53041 499 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 NDUFAF5Q5TEU4 345 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 OR2T4Q8NH00 348 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 CCDC32Q9BV29 185 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF160Q9HCG1 818 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 LIPT1Q9Y234 373 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 NPIPA5A0A0B4J1W7 369 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF487B1APH4 448 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 NPIPA7E9PJI5 369 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 H0Y8G0 127 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 F10P00742 488 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 EGFP01133 1207 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 SERPINE2P07093 398 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 NPIPA8P0DM63 369 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 CNR2P34972 360 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 APLNRP35414 380 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 AGAP7PQ5VUJ5 663 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 AGAP6Q5VW22 663 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 CLEC1AQ8NC01 280 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 OR2T35Q8NGX2 323 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 AGAP4Q96P64 663 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 DNAJB11Q9UBS4 358 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 MYO9BQ13459 2157 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 OR6C65A6NJZ3 312 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 C17orf105B2RV13 164 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 STMND1H3BQB6 276 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF780AO75290 641 aaPredicted RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 TNFRSF4P43489 277 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ADARB1P78563 741 aaKnown RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 MC2RQ01718 297 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 MRPL21Q7Z2W9 205 aaKnown RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 MCATQ8IVS2 390 aaKnown RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 MRPL41Q8IXM3 137 aaKnown RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ACVR1CQ8NER5 493 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 OR52N2Q8NGI0 321 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ZMYND19Q96E35 227 aaPredicted RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 OR5B2Q96R09 309 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 LHPPQ9H008 270 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 TAS2R8Q9NYW2 309 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 LYRM1O43325 122 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 BMP4P12644 408 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 TAS2R38P59533 333 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 FAM189BP81408 668 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 C6orf132Q5T0Z8 1188 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 KANSL1Q7Z3B3 1105 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 NANOS1Q8WY41 292 aaKnown RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 SPTSSAQ969W0 71 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 APIPQ96GX9 242 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 TMEM19Q96HH6 336 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF419Q96HQ0 510 aaPredicted RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 SMOXQ9NWM0 555 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 EDN3P14138 238 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 ACY1Q03154 408 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 OR9A2Q8NGT5 310 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 FEVQ99581 238 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 PRSS21Q9Y6M0 314 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 BTAF1O14981 1849 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 SOCS7O14512 581 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 TECPR1Q7Z6L1 1165 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 TDHQ8IZJ6 230 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 FOXN4Q96NZ1 517 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 CDC14CA4D256 554 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 DVL2O14641 736 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 DBHP09172 617 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 GAAP10253 952 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 TCTE1Q5JU00 501 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 UNC5DQ6UXZ4 953 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 FBXW12Q6X9E4 464 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 C3P1Q6ZMU1 363 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 CYB561A3Q8NBI2 242 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 OR9Q2Q8NGE9 314 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 SYNPRQ8TBG9 265 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 KCNJ16Q9NPI9 418 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 CNIH4Q9P003 139 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 PLEKHM1Q9Y4G2 1056 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 LOC102723532A0A0G2JNH3 316 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 ZBTB42B2RXF5 422 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 PSMB10P40306 273 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 BEX5Q5H9J7 111 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 SLC22A10Q63ZE4 541 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 KDELC1Q6UW63 502 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 C12orf45Q8N5I9 185 aaPredicted RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 OR5W2Q8NH69 310 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 HHIPL1Q96JK4 782 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 ARPC1BO15143 372 aaKnown RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 RAB3DO95716 219 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 SCGB1D1O95968 90 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 MGST1P10620 155 aaKnown RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 PRSS3P35030 304 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms