RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 GALEQ14376 348 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 ZIC1Q15915 447 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 PUS10Q3MIT2 529 aaKnown RBP15.24■□□□□ 0.03
SDC4-201ENST00000372733 PRPF38BQ5VTL8 546 aaKnown RBP15.24■□□□□ 0.03
SDC4-201ENST00000372733 WDR88Q6ZMY6 472 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 ZNF836Q6ZNA1 936 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 IDO2Q6ZQW0 420 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 GLRX5Q86SX6 157 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 TOMM5Q8N4H5 51 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 OR4D9Q8NGE8 314 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 GIMAP5Q96F15 307 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 C4orf36Q96KX1 117 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 OR2M2Q96R28 347 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 CACNG6Q9BXT2 260 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 OR51V1Q9H2C8 321 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 SLC6A20Q9NP91 592 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 C20orf141Q9NUB4 165 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 NLGN3Q9NZ94 848 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 CALML5Q9NZT1 146 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 SATB2Q9UPW6 733 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 TMEM5Q9Y2B1 443 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 NOTCH4Q99466 2003 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 PRR23AA6NEV1 266 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ANTXRLA6NF34 631 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 UNC119BA6NIH7 251 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 J3QLW9 94 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 MT-ND4P03905 459 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 PRG2P13727 222 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 SNRPBP14678 240 aaKnown RBP15.23■□□□□ 0.03
SDC4-201ENST00000372733 ZNF19P17023 458 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 MAKP20794 623 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 PPM1AP35813 382 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ZNF81P51508 661 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ST3GAL2Q16842 350 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ZNF687Q8N1G0 1237 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ABHD4Q8TB40 342 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 GIMAP1Q8WWP7 306 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 AHCYL2Q96HN2 611 aaKnown RBP15.23■□□□□ 0.03
SDC4-201ENST00000372733 INSM2Q96T92 566 aaPredicted RBP15.23■□□□□ 0.03
SDC4-201ENST00000372733 ERVMER34-1Q9H9K5 563 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 A0A1W2PPK0 400 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 SYNDIG1LA6NDD5 238 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 HIDE1A8MVS5 230 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 BHLHE40O14503 412 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 MT-ND5P03915 603 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 CLUP10909 449 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 M6PRP20645 277 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 DDX6P26196 483 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■□□□ 13.2
SDC4-201ENST00000372733 NOS3P29474 1203 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 HNRNPA1L2Q32P51 320 aaKnown RBP15.23■□□□□ 0.03
SDC4-201ENST00000372733 DGLUCYQ7Z3D6 616 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ADGRD2Q7Z7M1 963 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 SPERTQ8NA61 448 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 OR52L1Q8NGH7 329 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ADAMTS15Q8TE58 950 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 NDC1Q9BTX1 674 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 C1QTNF2Q9BXJ5 285 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 ACTRT3Q9BYD9 372 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 AUP1Q9Y679 476 aa15.23■□□□□ 0.03
SDC4-201ENST00000372733 MPC2O95563 127 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 MPIP34949 423 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 OR12D2P58182 307 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 EXOSC2Q13868 293 aaKnown RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 ADAMTSL4Q6UY14 1074 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 THSD4Q6ZMP0 1018 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 FBXL6Q8N531 539 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 TMIEQ8NEW7 156 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 BRIX1Q8TDN6 353 aaKnown RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 ZNF681Q96N22 645 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 PRSS27Q9BQR3 290 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 MYO7AQ13402 2215 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 SNRNP200O75643 2136 aaKnown RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 RPS10-NUDT3A0A1W2PQS6 291 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 A0A1W2PRG6 482 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 CDHR4A6H8M9 788 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 GPR171O14626 319 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 PLPP2O43688 288 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 IL9P15248 144 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 ZNF136P52737 540 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 VSX2P58304 361 aaPredicted RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 GSG1Q2KHT4 349 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 LGALSLQ3ZCW2 172 aaPredicted RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 TMEM52BQ4KMG9 183 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 CCNJQ5T5M9 372 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 COMMD7Q86VX2 200 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 IZUMO1Q8IYV9 350 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 TTLQ8NG68 377 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 OR2L5Q8NG80 312 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 OR7G2Q8NG99 324 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 OR5J2Q8NH18 312 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 OR51Q1Q8NH59 317 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 MARVELD3Q96A59 401 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 SORCS2Q96PQ0 1159 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 ORAI3Q9BRQ5 295 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 MRPS30Q9NP92 439 aaKnown RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 EVA1BQ9NVM1 165 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 SIDT1Q9NXL6 827 aaKnown RBP15.22■□□□□ 0.03
SDC4-201ENST00000372733 FBXL4Q9UKA2 621 aa15.22■□□□□ 0.03
SDC4-201ENST00000372733 OR1A2Q9Y585 309 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms