RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 RLIMQ9NVW2 624 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 HELZP42694 1942 aaKnown RBP6.51□□□□□ -1.37
USP1-202ENST00000371146 CLDN24A6NM45 220 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 H3BNH8 94 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 SCDO00767 359 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 TP53I11O14683 189 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 PROM1O43490 865 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 DIRAS1O95057 198 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 ALBP02768 609 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 TNFRSF1BP20333 461 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 BMP5P22003 454 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 CPOXP36551 454 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 SLC6A12P48065 614 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 POLR2JP52435 117 aaKnown RBP6.51□□□□□ -1.37
USP1-202ENST00000371146 RAB38P57729 211 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 EPS8Q12929 822 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 MED21Q13503 144 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 CARTPTQ16568 116 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 LRRC36Q1X8D7 754 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 ZNF766Q5HY98 468 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 RPS26P11Q5JNZ5 115 aaPredicted RBP6.51□□□□□ -1.37
USP1-202ENST00000371146 ZNF425Q6IV72 752 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 NANOGP8Q6NSW7 305 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 Q6ZSR9 355 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 KDM8Q8N371 416 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 ASCC1Q8N9N2 400 aaKnown RBP6.51□□□□□ -1.37
USP1-202ENST00000371146 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.51□□□□□ -1.371e-19■■■■□ 26
USP1-202ENST00000371146 PDLIM5Q96HC4 596 aaKnown RBP6.51□□□□□ -1.37
USP1-202ENST00000371146 SNX18Q96RF0 628 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 NTMT1Q9BV86 223 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 NMUR2Q9GZQ4 415 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 MCCC2Q9HCC0 563 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 PRDM9Q9NQV7 894 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 RSL24D1Q9UHA3 163 aaKnown RBP6.51□□□□□ -1.37
USP1-202ENST00000371146 HAO1Q9UJM8 370 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 ZNF225Q9UK10 706 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 CEP192Q8TEP8 1941 aa6.51□□□□□ -1.37
USP1-202ENST00000371146 PLCE1Q9P212 2302 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 GXYLT2A0PJZ3 443 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CTNSO60931 367 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PGM3O95394 542 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PSMG1O95456 288 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SNAP29O95721 258 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 IL6P05231 212 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SBK3P0C264 359 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CT62P0C5K7 136 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ETFAP13804 333 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 MATN1P21941 496 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 OR3A3P47888 321 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 MAD2L1Q13257 205 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 COTL1Q14019 142 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 TMEM35AQ53FP2 167 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 ZNF468Q5VIY5 522 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 DGAT2L6Q6ZPD8 337 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PLEKHM3Q6ZWE6 761 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PRSS42Q7Z5A4 293 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 MARCH3Q86UD3 253 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CARFQ8N187 725 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 FITM2Q8N6M3 262 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 C16orf52Q8NHV5 167 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CDS1Q92903 461 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SLC29A1Q99808 456 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 LHPPQ9H008 270 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 REEP4Q9H6H4 257 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SLAMF8Q9P0V8 285 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 RHCGQ9UBD6 479 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SEC14L3Q9UDX4 400 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 WDR45Q9Y484 360 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 DMRT1Q9Y5R6 373 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CEPT1Q9Y6K0 416 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 FREM3P0C091 2139 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ACOD1A6NK06 481 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ACOT7O00154 380 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 GYG2O15488 501 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 DDAH2O95865 285 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ITGB2P05107 769 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PGRP06401 933 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PRR35P0CG20 571 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ANPEPP15144 967 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PNLIPP16233 465 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 OR1E2P47887 323 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 UCNP55089 124 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PPIAP62937 165 aaKnown RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 GALK2Q01415 458 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SLC18A2Q05940 514 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 FAM53BQ14153 422 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 TBR1Q16650 682 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 C1orf146Q5VVC0 180 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 C1QL3Q5VWW1 255 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SLC22A10Q63ZE4 541 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 AAGABQ6PD74 315 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 KRT74Q7RTS7 529 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 C6orf120Q7Z4R8 191 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 HORMAD2Q8N7B1 307 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ABHD11Q8NFV4 315 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CHAC2Q8WUX2 184 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms