RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 BBS4Q96RK4 519 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR10A4Q9H209 315 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ANKRA2Q9H9E1 313 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 FANCEQ9HB96 536 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ZNF304Q9HCX3 659 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 NDE1Q9NXR1 346 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SLC39A1Q9NY26 324 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 TAS2R9Q9NYW1 312 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ADA2Q9NZK5 511 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PRPF19Q9UMS4 504 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 CCDC88CQ9P219 2028 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PDLIM1O00151 329 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CLIC1O00299 241 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ACOT8O14734 319 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CDC123O75794 336 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 BMP10O95393 424 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 FHP07954 510 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CPMP14384 443 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CSRP1P21291 193 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 MAOAP21397 527 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 FBLP22087 321 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 ME2P23368 584 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PPP2R1BP30154 601 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 NCBP2P52298 156 aaKnown RBP eCLIP3.29□□□□□ -1.88
MCF2-202ENST00000370573 ZNF134P52741 427 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 EEFSECP57772 596 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR4D2P58180 307 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ADAM8P78325 824 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ELF3P78545 371 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 LRRC74AQ0VAA2 488 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 HSPB3Q12988 150 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PCOLCEQ15113 449 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SEC23BQ15437 767 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 NKAIN1Q4KMZ8 207 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 VWA2Q5GFL6 755 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SAMD4BQ5PRF9 694 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 FHL5Q5TD97 284 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 HES3Q5TGS1 186 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 DGAT2L7PQ6IED9 249 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 NIPAL1Q6NVV3 410 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PRMT9Q6P2P2 845 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 NATD1Q8N6N6 113 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR7G2Q8NG99 324 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR8J3Q8NGG0 315 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR9A2Q8NGT5 310 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR14K1Q8NGZ2 314 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR10A6Q8NH74 314 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR5AK3PQ8NH89 298 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PNPT1Q8TCS8 783 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 KAT2AQ92830 837 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 DTNBP1Q96EV8 351 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ZBED6CLQ96FA7 236 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR14A2Q96R54 314 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 THUMPD3Q9BV44 507 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 SPRY4Q9C004 299 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ENKD1Q9H0I2 346 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SERHL2Q9H4I8 314 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 DENND2DQ9H6A0 471 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 KAT8Q9H7Z6 458 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 TPT1P8Q9HAU6 139 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SPAG4Q9NPE6 437 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PLA2G3Q9NZ20 509 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 NDUFAF4Q9P032 175 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 TRPC4Q9UBN4 977 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CTSFQ9UBX1 484 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PSME2Q9UL46 239 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 VPS4AQ9UN37 437 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CDC14AQ9UNH5 594 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CLCA2Q9UQC9 943 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 LOXL2Q9Y4K0 774 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 GMEB1Q9Y692 573 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ZNF780BQ9Y6R6 833 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SPACA6W5XKT8 324 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 IGLV3-12A0A075B6K2 115 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 IGKV3D-11A0A0A0MRZ8 115 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 FAM149AA5PLN7 773 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 TRIM64A6NGJ6 449 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 TRIM64BA6NI03 449 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 TMX2-CTNND1H3BSU7 103 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 PEX12O00623 359 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 NVLO15381 856 aaKnown RBP3.28□□□□□ -1.88
MCF2-202ENST00000370573 KCNK5O95279 499 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 ANP32DO95626 131 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 CT62P0C5K7 136 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 SLC35E2P0CK97 266 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 HSD17B1P14061 328 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 GPX2P18283 190 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 TCN1P20061 433 aaPredicted RBP3.28□□□□□ -1.88
MCF2-202ENST00000370573 S1PR1P21453 382 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 UQCRC2P22695 453 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 PAX7P23759 505 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 NTSP30990 170 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 MPIP34949 423 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 CCT3P49368 545 aaKnown RBP3.28□□□□□ -1.88
MCF2-202ENST00000370573 ERFP50548 548 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 HSD17B7P56937 341 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 RAP2BP61225 183 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 SKP1P63208 163 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 DCDP81605 110 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms