RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 EPGNQ6UW88 154 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 HDXQ7Z353 690 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 GRAMD2AQ8IUY3 354 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 GCNT2Q8N0V5 402 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF527Q8NB42 609 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 PHOSPHO1Q8TCT1 267 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 ZBTB8AQ96BR9 441 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF524Q96C55 264 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 MARK4Q96L34 752 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 INPP5KQ9BT40 448 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 SFXN3Q9BWM7 321 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 NMUR2Q9GZQ4 415 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF350Q9GZX5 532 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 MCCC2Q9HCC0 563 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 SLCO1B3Q9NPD5 702 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 USH1CQ9Y6N9 552 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 MYO9AB2RTY4 2548 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 AKAP9Q99996 3911 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 PRAMEF27A3QJZ7 478 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 GUSBP08236 651 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 OR12D1P0DN82 309 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 UQCRC1P31930 480 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 EEFSECP57772 596 aaKnown RBP17.05■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF141Q15928 474 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 CTU2Q2VPK5 515 aaKnown RBP17.05■□□□□ 0.32
CKS1B-203ENST00000368439 NDUFAF6Q330K2 333 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 TNFAIP8L2Q6P589 184 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-203ENST00000368439 GLB1L3Q8NCI6 653 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-203ENST00000368439 RAB8BQ92930 207 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF845Q96IR2 970 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-203ENST00000368439 ADGRG7Q96K78 797 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 OR52E6Q96RD3 313 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 SLC35A5Q9BS91 424 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 PINK1Q9BXM7 581 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 SDR39U1Q9NRG7 319 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-203ENST00000368439 CARD8Q9Y2G2 431 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 MPDZO75970 2070 aa17.05■□□□□ 0.32
CKS1B-203ENST00000368439 CCDC154A6NI56 674 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 SLC22A20A6NK97 555 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 EFNA2O43921 213 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 STX11O75558 287 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 UGT2B17O75795 530 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 IL11P20809 199 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 P2RX1P51575 399 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF41P51814 821 aaPredicted RBP17.04■□□□□ 0.32
CKS1B-203ENST00000368439 GSTA3Q16772 222 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 PDZK1Q5T2W1 519 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 TYW3Q6IPR3 259 aaKnown RBP17.04■□□□□ 0.32
CKS1B-203ENST00000368439 GPR119Q8TDV5 335 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 SMPDL3BQ92485 455 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 RNF145Q96MT1 663 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 SAP130Q9H0E3 1048 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 ACBD3Q9H3P7 528 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 SLC6A13Q9NSD5 602 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 EXD2Q9NVH0 621 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 ZIM2Q9NZV7 527 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 FOXD3Q9UJU5 478 aaPredicted RBP17.04■□□□□ 0.32
CKS1B-203ENST00000368439 MKLN1Q9UL63 735 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF175Q9Y473 711 aa17.04■□□□□ 0.32
CKS1B-203ENST00000368439 A0A1W2PNV4 684 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 HMGB1P1B2RPK0 211 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-203ENST00000368439 HMGN4O00479 90 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 UBDO15205 165 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 DNAJA2O60884 412 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 SLC22A3O75751 556 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 AGR2O95994 175 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 IL6P05231 212 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 SUMO3P55854 103 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-203ENST00000368439 RAC1P63000 192 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 LRRC74AQ0VAA2 488 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 PON3Q15166 354 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 GUSBP1Q15486 140 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 GPR68Q15743 365 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 TOMM34Q15785 309 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-203ENST00000368439 MAPK14Q16539 360 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 CHMP1BQ7LBR1 199 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 FNDC9Q8TBE3 224 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 LRRC8CQ8TDW0 803 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 XAGE5Q8WWM1 108 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 ROPN1LQ96C74 230 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 ARSGQ96EG1 525 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 PANX1Q96RD7 426 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 ZBTB18Q99592 522 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF559Q9BR84 538 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 RNF122Q9H9V4 155 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 OTOGQ6ZRI0 2925 aa17.03■□□□□ 0.32
CKS1B-203ENST00000368439 SERINC4A6NH21 518 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 EEF1E1-BLOC1S5C9J1V9 151 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 H3BNH8 94 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 ETV2O00321 342 aaPredicted RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 ADAMDEC1O15204 470 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF264O43296 627 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 EEF1E1O43324 174 aaKnown RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 KIAA0513O60268 411 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 EIF4E2O60573 245 aaKnown RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 DIAPH2O60879 1101 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 SASH3O75995 380 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 NTN1O95631 604 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 GSNP06396 782 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms